RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 BTBD17A6NE02 478 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 RBMXL2O75526 392 aaKnown RBP10.32□□□□□ -0.76
CLK3-214ENST00000564096 CCNKO75909 580 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 IGKV1-39P01597 117 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 IGKV1D-39P04432 117 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 SNRNP70P08621 437 aaKnown RBP10.32□□□□□ -0.76
CLK3-214ENST00000564096 PET100P0DJ07 73 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 SLC25A6P12236 298 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 TMEM11P17152 192 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 BRWD1-AS2P59051 145 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 POU2AF1Q16633 256 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 IAH1Q2TAA2 248 aaPredicted RBP10.32□□□□□ -0.76
CLK3-214ENST00000564096 NMSQ5H8A3 153 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 FAM120AOSQ5T036 256 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 OR11H7Q8NGC8 314 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 OR4A5Q8NH83 315 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 C17orf50Q8WW18 174 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 SEC22AQ96IW7 307 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 RHOVQ96L33 236 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 ZNF436Q9C0F3 470 aaPredicted RBP10.32□□□□□ -0.76
CLK3-214ENST00000564096 RANBP3Q9H6Z4 567 aaPredicted RBP10.32□□□□□ -0.76
CLK3-214ENST00000564096 ZFP57Q9NU63 452 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 TMEM140Q9NV12 185 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 KIAA1456Q9P272 454 aa10.32□□□□□ -0.76
CLK3-214ENST00000564096 ARHGAP32A7KAX9 2087 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 A0A1B0GU03 582 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 SNAPC5O75971 98 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 IGKV1-5P01602 117 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 UBE2KP61086 200 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 RAP2BP61225 183 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 CD83Q01151 205 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 SMCO1Q147U7 214 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 MMDQ15546 238 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 SSX9Q7RTT3 188 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 THNSL2Q86YJ6 484 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 DYNAPQ8N1N2 210 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 OR8H1Q8NGG4 311 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 OR1S1Q8NH92 325 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 C2orf50Q96LR7 162 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 CHIAQ9BZP6 476 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 NMES1Q9C002 83 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 MEGF9Q9H1U4 602 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 COA4Q9NYJ1 87 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 BET1LQ9NYM9 111 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 C1RLQ9NZP8 487 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 CACNG5Q9UF02 275 aa10.31□□□□□ -0.76
CLK3-214ENST00000564096 NOTCH2Q04721 2471 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 ITPR3Q14573 2671 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 NBR2O15453 112 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 OR2A4O95047 310 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 SAA1P0DJI8 122 aaPredicted RBP10.3□□□□□ -0.76
CLK3-214ENST00000564096 CXCL3P19876 107 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 H2BFSP57053 126 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 PLGLAQ15195 96 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 OR4A47Q6IF82 309 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 FOXRED2Q8IWF2 684 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 ZBTB8BQ8NAP8 495 aaPredicted RBP10.3□□□□□ -0.76
CLK3-214ENST00000564096 OR4A16Q8NH70 328 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 OR5R1Q8NH85 324 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 ZDHHC16Q969W1 377 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 AJUBAQ96IF1 538 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 OR2A7Q96R45 310 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 TMUB1Q9BVT8 246 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 PITPNC1Q9UKF7 332 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 PRNDQ9UKY0 176 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 CSMD1Q96PZ7 3565 aa10.3□□□□□ -0.76
CLK3-214ENST00000564096 KBTBD11O94819 623 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 SIX6O95475 246 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 FGF2P09038 288 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 P0C879 139 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 FGL1Q08830 312 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 EBI3Q14213 229 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 CLEC9AQ6UXN8 241 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 VKORC1L1Q8N0U8 176 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 TEX45Q8NA69 505 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 GPR146Q96CH1 333 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 EAF1Q96JC9 268 aaPredicted RBP10.29□□□□□ -0.76
CLK3-214ENST00000564096 FKBP11Q9NYL4 201 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 GSKIPQ9P0R6 139 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 CDC42EP3Q9UKI2 254 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 MED13LQ71F56 2210 aa10.29□□□□□ -0.76
CLK3-214ENST00000564096 A0A0G2JRQ6 117 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 C15orf61A6NNL5 157 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 FAM90A26D6RGX4 464 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 WRBO00258 174 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 SLC25A17O43808 307 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 ACTL6BO94805 426 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 SCGB1D2O95969 90 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 NKX2-1P43699 371 aaPredicted RBP10.28□□□□□ -0.76
CLK3-214ENST00000564096 S100A10P60903 97 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 SRSF4Q08170 494 aaKnown RBP10.28□□□□□ -0.76
CLK3-214ENST00000564096 C2orf68Q2NKX9 166 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 RBMS3Q6XE24 437 aaKnown RBP10.28□□□□□ -0.76
CLK3-214ENST00000564096 TCTE3Q8IZS6 198 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 PUSL1Q8N0Z8 303 aaKnown RBP10.28□□□□□ -0.76
CLK3-214ENST00000564096 OR2T35Q8NGX2 323 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 OR10C1Q96KK4 312 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 CLCC1Q96S66 551 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 SSX3Q99909 188 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms