RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 NKX6-1P78426 367 aaPredicted RBP16.55■□□□□ 0.24
MSLN-205ENST00000563941 VKORC1L1Q8N0U8 176 aa16.55■□□□□ 0.24
MSLN-205ENST00000563941 Q8N7P7 452 aa16.55■□□□□ 0.24
MSLN-205ENST00000563941 OR4F5Q8NH21 305 aa16.55■□□□□ 0.24
MSLN-205ENST00000563941 OR4F4Q96R69 305 aa16.55■□□□□ 0.24
MSLN-205ENST00000563941 CALYQ9NYX4 217 aa16.55■□□□□ 0.24
MSLN-205ENST00000563941 WDR83OSQ9Y284 106 aa16.55■□□□□ 0.24
MSLN-205ENST00000563941 RBFOX2O43251 390 aaKnown RBP eCLIP16.55■□□□□ 0.244e-9■■■■■ 35.4
MSLN-205ENST00000563941 LHBP01229 141 aa16.55■□□□□ 0.24
MSLN-205ENST00000563941 CD1BP29016 333 aa16.55■□□□□ 0.24
MSLN-205ENST00000563941 ERVK-16P61578 105 aa16.55■□□□□ 0.24
MSLN-205ENST00000563941 ACOT6Q3I5F7 207 aaPredicted RBP16.55■□□□□ 0.24
MSLN-205ENST00000563941 SPNS3Q6ZMD2 512 aa16.55■□□□□ 0.24
MSLN-205ENST00000563941 PARLQ9H300 379 aa16.55■□□□□ 0.24
MSLN-205ENST00000563941 CFAP47Q6ZTR5 3102 aa16.54■□□□□ 0.24
MSLN-205ENST00000563941 IFITM10A6NMD0 228 aa16.54■□□□□ 0.24
MSLN-205ENST00000563941 LY86O95711 162 aa16.54■□□□□ 0.24
MSLN-205ENST00000563941 FABP1P07148 127 aa16.54■□□□□ 0.24
MSLN-205ENST00000563941 CDC34P49427 236 aaPredicted RBP16.54■□□□□ 0.24
MSLN-205ENST00000563941 IGFL3Q6UXB1 125 aa16.54■□□□□ 0.24
MSLN-205ENST00000563941 S1PR3Q99500 378 aa16.54■□□□□ 0.24
MSLN-205ENST00000563941 TRBV24-1A0A075B6N3 115 aa16.54■□□□□ 0.24
MSLN-205ENST00000563941 SLC31A2O15432 143 aa16.54■□□□□ 0.24
MSLN-205ENST00000563941 IFNA10P01566 189 aa16.54■□□□□ 0.24
MSLN-205ENST00000563941 SELLP14151 372 aa16.54■□□□□ 0.24
MSLN-205ENST00000563941 RPP30P78346 268 aaKnown RBP16.54■□□□□ 0.24
MSLN-205ENST00000563941 FAM201AQ5SY85 155 aa16.54■□□□□ 0.24
MSLN-205ENST00000563941 DIRC2Q96SL1 478 aa16.54■□□□□ 0.24
MSLN-205ENST00000563941 GSN-AS1Q9NRJ2 163 aa16.54■□□□□ 0.24
MSLN-205ENST00000563941 PAGE4O60829 102 aa16.53■□□□□ 0.24
MSLN-205ENST00000563941 RPL23P62829 140 aaKnown RBP16.53■□□□□ 0.24
MSLN-205ENST00000563941 TCF15Q12870 199 aa16.53■□□□□ 0.24
MSLN-205ENST00000563941 BSXQ3C1V8 233 aa16.53■□□□□ 0.24
MSLN-205ENST00000563941 UTF1Q5T230 341 aa16.53■□□□□ 0.24
MSLN-205ENST00000563941 C1orf185Q5T7R7 199 aa16.53■□□□□ 0.24
MSLN-205ENST00000563941 C16orf82Q7Z2V1 217 aa16.53■□□□□ 0.24
MSLN-205ENST00000563941 OR52E5Q8NH55 327 aa16.53■□□□□ 0.24
MSLN-205ENST00000563941 CADP27708 2225 aa16.53■□□□□ 0.24
MSLN-205ENST00000563941 IGLV3-9A0A075B6K5 115 aa16.52■□□□□ 0.24
MSLN-205ENST00000563941 TRAV3A0A0B4J244 114 aa16.52■□□□□ 0.24
MSLN-205ENST00000563941 TGOLN2O43493 480 aa16.52■□□□□ 0.24
MSLN-205ENST00000563941 CGB3P0DN86 165 aa16.52■□□□□ 0.24
MSLN-205ENST00000563941 CGB7P0DN87 165 aa16.52■□□□□ 0.24
MSLN-205ENST00000563941 KIR2DS2P43631 304 aa16.52■□□□□ 0.24
MSLN-205ENST00000563941 VDAC2P45880 294 aaPredicted RBP16.52■□□□□ 0.24
MSLN-205ENST00000563941 RELBQ01201 579 aa16.52■□□□□ 0.24
MSLN-205ENST00000563941 C3orf36Q3SXR2 165 aa16.52■□□□□ 0.24
MSLN-205ENST00000563941 LEAP2Q969E1 77 aa16.52■□□□□ 0.24
MSLN-205ENST00000563941 HEYLQ9NQ87 328 aaPredicted RBP16.52■□□□□ 0.24
MSLN-205ENST00000563941 TET2Q6N021 2002 aaPredicted RBP16.52■□□□□ 0.24
MSLN-205ENST00000563941 SMCO3A2RU48 225 aa16.52■□□□□ 0.23
MSLN-205ENST00000563941 NDUFS6O75380 124 aaKnown RBP16.52■□□□□ 0.23
MSLN-205ENST00000563941 TRGC1P0CF51 173 aa16.52■□□□□ 0.23
MSLN-205ENST00000563941 C17orf58Q2M2W7 97 aa16.52■□□□□ 0.23
MSLN-205ENST00000563941 C1orf229Q6ZS94 237 aaPredicted RBP16.52■□□□□ 0.23
MSLN-205ENST00000563941 ABHD5Q8WTS1 349 aa16.52■□□□□ 0.23
MSLN-205ENST00000563941 DDB2Q92466 427 aa16.52■□□□□ 0.23
MSLN-205ENST00000563941 FRZBQ92765 325 aa16.52■□□□□ 0.23
MSLN-205ENST00000563941 TMEM140Q9NV12 185 aa16.52■□□□□ 0.23
MSLN-205ENST00000563941 DSCAMO60469 2012 aa16.52■□□□□ 0.23
MSLN-205ENST00000563941 SEC14L6B5MCN3 397 aa16.51■□□□□ 0.23
MSLN-205ENST00000563941 RRHO14718 337 aa16.51■□□□□ 0.23
MSLN-205ENST00000563941 PDLIM3Q53GG5 364 aaPredicted RBP16.51■□□□□ 0.23
MSLN-205ENST00000563941 GCSAMLQ5JQS6 135 aa16.51■□□□□ 0.23
MSLN-205ENST00000563941 OR51M1Q9H341 326 aa16.51■□□□□ 0.23
MSLN-205ENST00000563941 RAB7AP51149 207 aa16.51■□□□□ 0.23
MSLN-205ENST00000563941 Q6ZS92 163 aa16.51■□□□□ 0.23
MSLN-205ENST00000563941 NEIL1Q96FI4 390 aaPredicted RBP16.51■□□□□ 0.23
MSLN-205ENST00000563941 NCOR1P1Q9H4R4 102 aa16.51■□□□□ 0.23
MSLN-205ENST00000563941 GFOD1Q9NXC2 390 aa16.51■□□□□ 0.23
MSLN-205ENST00000563941 MIOXQ9UGB7 285 aa16.51■□□□□ 0.23
MSLN-205ENST00000563941 DSCAML1Q8TD84 2053 aa16.5■□□□□ 0.23
MSLN-205ENST00000563941 TRAV38-1A0A0B4J264 116 aa16.5■□□□□ 0.23
MSLN-205ENST00000563941 GFRA3O60609 400 aa16.5■□□□□ 0.23
MSLN-205ENST00000563941 GATA4P43694 442 aa16.5■□□□□ 0.23
MSLN-205ENST00000563941 DUX4L9Q6RFH8 374 aaPredicted RBP16.5■□□□□ 0.23
MSLN-205ENST00000563941 OR4S2Q8NH73 311 aa16.5■□□□□ 0.23
MSLN-205ENST00000563941 FAM222BQ8WU58 562 aa16.5■□□□□ 0.23
MSLN-205ENST00000563941 GGACTQ9BVM4 153 aa16.5■□□□□ 0.23
MSLN-205ENST00000563941 GAR1Q9NY12 217 aaKnown RBP16.5■□□□□ 0.23
MSLN-205ENST00000563941 LINC00587B1AMM8 73 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 PRSS46E5RG02 174 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 ITGB1BP1O14713 200 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 MPDU1O75352 247 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 S100A2P29034 98 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 TIMP3P35625 211 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 CT45A1Q5HYN5 189 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 TREML4Q6UXN2 200 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 CT45A3Q8NHU0 189 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 RAB9BQ9NP90 201 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 RNF7Q9UBF6 113 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 GAB2Q9UQC2 676 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 RIF1Q5UIP0 2472 aaKnown RBP16.49■□□□□ 0.23
MSLN-205ENST00000563941 TANC2Q9HCD6 1990 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 ZFHX2Q9C0A1 2572 aaPredicted RBP16.49■□□□□ 0.23
MSLN-205ENST00000563941 KBTBD11-OT1A0A1B0GTJ5 212 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 C11orf94C9JXX5 98 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 PHOX2AO14813 284 aa16.49■□□□□ 0.23
MSLN-205ENST00000563941 PFN1P07737 140 aaKnown RBP16.49■□□□□ 0.23
MSLN-205ENST00000563941 NECAP1Q8NC96 275 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms