RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 IGFBP3P17936 291 aaPredicted RBP7.24□□□□□ -1.25
HDGFL3-204ENST00000563790 PPP1CCP36873 323 aaKnown RBP7.24□□□□□ -1.25
HDGFL3-204ENST00000563790 GTF2A1P52655 376 aaPredicted RBP7.24□□□□□ -1.25
HDGFL3-204ENST00000563790 FAM106AQ4KMX7 169 aa7.24□□□□□ -1.25
HDGFL3-204ENST00000563790 ZNF585BQ52M93 769 aa7.24□□□□□ -1.25
HDGFL3-204ENST00000563790 LY6G6FQ5SQ64 297 aa7.24□□□□□ -1.25
HDGFL3-204ENST00000563790 SCXQ7RTU7 201 aa7.24□□□□□ -1.25
HDGFL3-204ENST00000563790 OR52L2PQ8NGH6 319 aa7.24□□□□□ -1.25
HDGFL3-204ENST00000563790 OR5AK2Q8NH90 309 aa7.24□□□□□ -1.25
HDGFL3-204ENST00000563790 TRUB1Q8WWH5 349 aaKnown RBP7.24□□□□□ -1.25
HDGFL3-204ENST00000563790 ABHD14AQ9BUJ0 271 aa7.24□□□□□ -1.25
HDGFL3-204ENST00000563790 ALG8Q9BVK2 526 aa7.24□□□□□ -1.25
HDGFL3-204ENST00000563790 OAZ3Q9UMX2 235 aa7.24□□□□□ -1.25
HDGFL3-204ENST00000563790 FAM223BA6NKX1 122 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 SPINT2O43291 252 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 CA2P00918 260 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 REG1AP05451 166 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 CT45A6P0DMU7 189 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 CT45A5P0DMU8 189 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 CT45A7P0DMV0 189 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 SERPINA2P20848 420 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 SOX2P48431 317 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 LAMTOR1Q6IAA8 161 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 FAM223AQ8IWN6 122 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 CSNK1G2-AS1Q8NCQ2 148 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 MRPL30Q8TCC3 161 aaKnown RBP7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 GHSRQ92847 366 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 TMEM68Q96MH6 324 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 AGMATQ9BSE5 352 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 UPK3BQ9BT76 320 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 FAM192AQ9GZU8 254 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 METTL9Q9H1A3 318 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 TAF9BQ9HBM6 251 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 AKIP1Q9NQ31 210 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 OR2S2Q9NQN1 319 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 ERVK13-1Q9NX77 482 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 COA4Q9NYJ1 87 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 ENOPH1Q9UHY7 261 aa7.23□□□□□ -1.25
HDGFL3-204ENST00000563790 TRAV8-7A0A075B6U6 113 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 TEX48A0A1B0GUV7 120 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 H0YJW9 148 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 YPEL1O60688 119 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 FADS2O95864 444 aaKnown RBP7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 ALPLP05186 524 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 LIMS3P0CW19 117 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 LIMS4P0CW20 117 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 ZNF93P35789 620 aaPredicted RBP7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 RPS11P62280 158 aaKnown RBP eCLIP7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 HTD2P86397 168 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 FXYD3Q14802 87 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 DDI2Q5TDH0 399 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 ZNF554Q86TJ5 538 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 PRR18Q8N4B5 295 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 OR5AN1Q8NGI8 311 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 CPNE2Q96FN4 548 aaPredicted RBP7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 YPEL2Q96QA6 119 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 OR14A2Q96R54 314 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 CLCC1Q96S66 551 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 GPER1Q99527 375 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 TMEM138Q9NPI0 162 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 DKK2Q9UBU2 259 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 JPT1Q9UK76 154 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 ING4Q9UNL4 249 aa7.22□□□□□ -1.25
HDGFL3-204ENST00000563790 TRBV5-7A0A0A0MS05 114 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 TRBV5-5A0A0J9YX44 114 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 RPS10-NUDT3A0A1W2PQS6 291 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 FAM90A7PA6NKC0 464 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 FAM90A23PA8MXZ1 464 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 GPX5O75715 221 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 NUDT3O95989 172 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 GTF2F2P13984 249 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 RHOGP84095 191 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 ATP5G2Q06055 141 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 RPL39P5Q59GN2 51 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 C6orf183Q5T699 404 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 DMKNQ6E0U4 476 aaPredicted RBP7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 RAB12Q6IQ22 244 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 FAM71F2Q6NXP2 309 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 GLDNQ6ZMI3 551 aaPredicted RBP7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 Q96M66 194 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 ZNF184Q99676 751 aaPredicted RBP7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 MRPS18AQ9NVS2 196 aaKnown RBP7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 TRAPPC2LQ9UL33 140 aa7.21□□□□□ -1.26
HDGFL3-204ENST00000563790 SYNE2Q8WXH0 6885 aaKnown RBP7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 DBX1A6NMT0 343 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 MCRIP1C9JLW8 97 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 SLC22A1O15245 554 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 GYG2O15488 501 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 ATP8B1O43520 1251 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 ZNF780AO75290 641 aaPredicted RBP7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 CA11O75493 328 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 LALBAP00709 142 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 IGKV1-16P04430 117 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 RPSAP08865 295 aaKnown RBP7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 MYOD1P15172 320 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 C4BPBP20851 252 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 BDKRB2P30411 391 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 MRPL28Q13084 256 aaKnown RBP7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 PSG5Q15238 335 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 HMGN3Q15651 99 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms