RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 OR6M1Q8NGM8 313 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 CENPOQ9BU64 300 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 GGTLC1Q9BX51 225 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 TXNL4BQ9NX01 149 aaKnown RBP7.7□□□□□ -1.18
SF3B3-204ENST00000563739 GHRLQ9UBU3 117 aa7.7□□□□□ -1.18
SF3B3-204ENST00000563739 AK6Q9Y3D8 172 aaKnown RBP7.7□□□□□ -1.18
SF3B3-204ENST00000563739 TRBV9A0A0B4J1U6 114 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 IGKV1-6A0A0C4DH72 117 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 A0A0G2JLM5 398 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 SRRM4A7MD48 611 aaKnown RBP7.69□□□□□ -1.18
SF3B3-204ENST00000563739 SLC17A2O00624 439 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 PDCD6O75340 191 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 CRTAPO75718 401 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-204ENST00000563739 BPNT1O95861 308 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 PRH1P02810 166 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 GLAP06280 429 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 APELAP0DMC3 54 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 ATF4P18848 351 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-204ENST00000563739 FUT3P21217 361 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 HTR2CP28335 458 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 KIR2DS2P43631 304 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 RAB11BQ15907 218 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 CROCCP3Q8IVE0 287 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 FAM46BQ96A09 425 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 RNF5Q99942 180 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 SELENOIQ9C0D9 397 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 SLIRPQ9GZT3 109 aaKnown RBP7.69□□□□□ -1.18
SF3B3-204ENST00000563739 NXF2Q9GZY0 626 aaKnown RBP7.69□□□□□ -1.18
SF3B3-204ENST00000563739 C11orf54Q9H0W9 315 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-204ENST00000563739 KCNK15Q9H427 330 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 RNF167Q9H6Y7 350 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 RAB9BQ9NP90 201 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 AKIP1Q9NQ31 210 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 ZNF355PQ9NSJ1 428 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 SLC2A8Q9NY64 477 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 CCDC59Q9P031 241 aaKnown RBP7.69□□□□□ -1.18
SF3B3-204ENST00000563739 MLXQ9UH92 298 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 SSR3Q9UNL2 185 aa7.69□□□□□ -1.18
SF3B3-204ENST00000563739 DNAH5Q8TE73 4624 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 A0A0A6YYD4 124 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 TMEM213A2RRL7 107 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 PPP5D1E7EU14 171 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 ITGB1BP1O14713 200 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 PDCD5O14737 125 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 RAB29O14966 203 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 S1PR2O95136 353 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 HLA-AP01891 365 aaKnown RBP7.68□□□□□ -1.18
SF3B3-204ENST00000563739 FOLR2P14207 255 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 PSMD7P51665 324 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 OR10A3P58181 314 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 QRFPP83859 136 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 UNC119Q13432 240 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 EXOSC2Q13868 293 aaKnown RBP7.68□□□□□ -1.18
SF3B3-204ENST00000563739 P2RY14Q15391 338 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 S100ZQ8WXG8 99 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 BORCS5Q969J3 196 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 HDHD3Q9BSH5 251 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-204ENST00000563739 PIPOXQ9P0Z9 390 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 V9GY05 133 aa7.68□□□□□ -1.18
SF3B3-204ENST00000563739 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.67□□□□□ -1.18
SF3B3-204ENST00000563739 TMEM14DPA8MWL7 114 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 H7C2Y5 167 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 GSTP1P09211 210 aaKnown RBP7.67□□□□□ -1.18
SF3B3-204ENST00000563739 RAB3BP20337 219 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 AADACP22760 399 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 MC5RP33032 325 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 CLDN12P56749 244 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 RPS27AP62979 156 aaKnown RBP7.67□□□□□ -1.18
SF3B3-204ENST00000563739 ZNF846Q147U1 533 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 DEFB135Q30KP9 77 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 C4orf48Q5BLP8 95 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 HES5Q5TA89 166 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 OR10K2Q6IF99 312 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 C6orf201Q7Z4U5 140 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 NR2C2APQ86WQ0 139 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 MCFD2Q8NI22 146 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 PHLDA1Q8WV24 401 aaPredicted RBP7.67□□□□□ -1.18
SF3B3-204ENST00000563739 GALMQ96C23 342 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 USMG5Q96IX5 58 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 NICN1Q9BSH3 213 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 TMEM59Q9BXS4 323 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 WDR12Q9GZL7 423 aaKnown RBP7.67□□□□□ -1.18
SF3B3-204ENST00000563739 STEAP1Q9UHE8 339 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 TP53TG1Q9Y2A0 90 aa7.67□□□□□ -1.18
SF3B3-204ENST00000563739 LOC102724200A0A096LPH7 203 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-204ENST00000563739 A0A1B0GW64 132 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 SMIM30A4D0T7 59 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 IFITM5A6NNB3 132 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 SDC2P34741 201 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 RANBP1P43487 201 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 RHOGP84095 191 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 GUCA2BQ16661 112 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 C10orf55Q5SWW7 151 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 TPRA1Q86W33 373 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 PDPNQ86YL7 162 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 IL1F10Q8WWZ1 152 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 EDARADDQ8WWZ3 215 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 PTX4Q96A99 478 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 FAM3DQ96BQ1 224 aa7.66□□□□□ -1.18
SF3B3-204ENST00000563739 CCDC140Q96MF4 163 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms