RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 FCGR3AP08637 254 aa12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 SERPINB10P48595 397 aa12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 RPEL1Q2QD12 228 aa12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 LINC00322Q6ZN03 302 aaPredicted RBP12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 IDO2Q6ZQW0 420 aa12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 CLVS1Q8IUQ0 354 aaPredicted RBP12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 Q8N402 240 aa12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 DDB2Q92466 427 aa12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 USMG5Q96IX5 58 aa12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 TUBA4BQ9H853 241 aa12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 CEPT1Q9Y6K0 416 aa12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 BMPR1BO00238 502 aa12.72□□□□□ -0.37
HDGFL3-203ENST00000563404 OR2A4O95047 310 aa12.72□□□□□ -0.37
HDGFL3-203ENST00000563404 PRH1P02810 166 aa12.72□□□□□ -0.37
HDGFL3-203ENST00000563404 SCAND1P57086 179 aa12.72□□□□□ -0.37
HDGFL3-203ENST00000563404 ZNF45Q02386 682 aa12.72□□□□□ -0.37
HDGFL3-203ENST00000563404 PRSS8Q16651 343 aa12.72□□□□□ -0.37
HDGFL3-203ENST00000563404 HES5Q5TA89 166 aa12.72□□□□□ -0.37
HDGFL3-203ENST00000563404 LCN12Q6JVE5 192 aa12.72□□□□□ -0.37
HDGFL3-203ENST00000563404 GTSCR1Q86UQ5 136 aa12.72□□□□□ -0.37
HDGFL3-203ENST00000563404 PHB2Q99623 299 aa12.72□□□□□ -0.37
HDGFL3-203ENST00000563404 ZNF230Q9UIE0 474 aaPredicted RBP12.72□□□□□ -0.37
HDGFL3-203ENST00000563404 LINC00473A8K010 186 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 NOL3O60936 208 aaKnown RBP12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 IFNA6P05013 189 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 OR9G9P0C7N8 305 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 RPS19P39019 145 aaKnown RBP12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 VBP1P61758 197 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 NCS1P62166 190 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 TNXAQ16473 311 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 TEX45Q8NA69 505 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 OR10J5Q8NHC4 309 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 SRSF12Q8WXF0 261 aaKnown RBP12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 FAM110AQ9BQ89 295 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 NAA50Q9GZZ1 169 aaKnown RBP12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 RBM38Q9H0Z9 239 aaKnown RBP12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 HIPK2Q9H2X6 1198 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 RNF167Q9H6Y7 350 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 PLEKHA3Q9HB20 300 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 AKIP1Q9NQ31 210 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 RAB22AQ9UL26 194 aa12.71□□□□□ -0.37
HDGFL3-203ENST00000563404 IGKV1D-8A0A087WSZ0 117 aa12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 TRBV9A0A0B4J1U6 114 aa12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 ZNF785A8K8V0 405 aa12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 GNB3P16520 340 aa12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 EDN2P20800 178 aa12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 DUTP33316 252 aaKnown RBP12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 UBE2KP61086 200 aa12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 LSM3P62310 102 aaKnown RBP12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 TAGLNQ01995 201 aaKnown RBP12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 TATDN3Q17R31 274 aa12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 RTL8BQ17RB0 113 aa12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 CD300EQ496F6 205 aaPredicted RBP12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 NR2C2APQ86WQ0 139 aa12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 SNAPC3Q92966 411 aa12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 SLC25A46Q96AG3 418 aa12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 DGCR14Q96DF8 476 aaKnown RBP12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 RAB3CQ96E17 227 aa12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 BATF3Q9NR55 127 aa12.7□□□□□ -0.38
HDGFL3-203ENST00000563404 MFNGO00587 321 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 DIRAS3O95661 229 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 CRYZL1O95825 349 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 CD7P09564 240 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 RRASP10301 218 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 OR10A3P58181 314 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 RHOGP84095 191 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 CBX3Q13185 183 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 EXOSC2Q13868 293 aaKnown RBP12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 VMA21Q3ZAQ7 101 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 SFXN4Q6P4A7 337 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 OR2K2Q8NGT1 345 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 OR10R2Q8NGX6 335 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 WFDC10AQ9H1F0 79 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 DCSTAMPQ9H295 470 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 ZNF430Q9H8G1 570 aaPredicted RBP12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 DMRT1Q9Y5R6 373 aa12.69□□□□□ -0.38
HDGFL3-203ENST00000563404 RBMY1BA6NDE4 496 aaKnown RBP12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 RBMY1EA6NEQ0 496 aaKnown RBP12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 RAB27BO00194 218 aa12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 RBMY1DP0C7P1 496 aaKnown RBP12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 RORCP51449 518 aa12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 CD81P60033 236 aa12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 MRPS15P82914 257 aaKnown RBP12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 C10orf55Q5SWW7 151 aa12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 H1FOOQ8IZA3 346 aaPredicted RBP12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 DEFB125Q8N687 156 aa12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 ACOT12Q8WYK0 555 aa12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 NEURL2Q9BR09 285 aa12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 PEMTQ9UBM1 199 aa12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 RSL24D1Q9UHA3 163 aaKnown RBP12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 ELF5Q9UKW6 265 aaPredicted RBP12.68□□□□□ -0.38
HDGFL3-203ENST00000563404 A0A075B6Q4 140 aa12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 A0A0B4J203 849 aa12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 DPPA5A6NC42 116 aa12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 FAM223BA6NKX1 122 aa12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 H3BMQ9 156 aa12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 MPPED1O15442 326 aa12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 CLEC2LP0C7M8 214 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms