RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 OPN1MW2P0DN77 364 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 OPN1MW3P0DN78 364 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 VDAC1P21796 283 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 HERV-K104P61576 105 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 RPL23AP62750 156 aaKnown RBP6.67□□□□□ -1.34
UBR1-204ENST00000563239 SLC35B1P78383 322 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 FOXE3Q13461 319 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 PLGLAQ15195 96 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 PRSS8Q16651 343 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 ASPHD1Q5U4P2 390 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 TEX38Q6PEX7 206 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 ETV3LQ6ZN32 361 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 IDO2Q6ZQW0 420 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 VKORC1L1Q8N0U8 176 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 PUSL1Q8N0Z8 303 aaKnown RBP6.67□□□□□ -1.34
UBR1-204ENST00000563239 COMMD1Q8N668 190 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 TEX45Q8NA69 505 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 TMEM229BQ8NBD8 167 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 MRGPRFQ96AM1 343 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 RSRP1Q9BUV0 290 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 PRELID3BQ9Y3B1 194 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 A3GALT2U3KPV4 340 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 V9GYH0 126 aa6.67□□□□□ -1.34
UBR1-204ENST00000563239 RBFOX2O43251 390 aaKnown RBP eCLIP6.66□□□□□ -1.34
UBR1-204ENST00000563239 ELANEP08246 267 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 IL6RP08887 468 aaPredicted RBP6.66□□□□□ -1.34
UBR1-204ENST00000563239 TBPP20226 339 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 UCP3P55916 312 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 MRPS10P82664 201 aaKnown RBP6.66□□□□□ -1.34
UBR1-204ENST00000563239 SSBP1Q04837 148 aaKnown RBP6.66□□□□□ -1.34
UBR1-204ENST00000563239 CBX3Q13185 183 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 IL18Q14116 193 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 FXYD3Q14802 87 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 VMA21Q3ZAQ7 101 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 ZNF585BQ52M93 769 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 AKIRIN2Q53H80 203 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 ACTBL2Q562R1 376 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 CCDC190Q86UF4 302 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 SPAG16Q8N0X2 631 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 LFNGQ8NES3 379 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 OR4S2Q8NH73 311 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 ARPC1AQ92747 370 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 R3HDM4Q96D70 268 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 DGCR14Q96DF8 476 aaKnown RBP6.66□□□□□ -1.34
UBR1-204ENST00000563239 GON7Q9BXV9 100 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 ZNF430Q9H8G1 570 aaPredicted RBP6.66□□□□□ -1.34
UBR1-204ENST00000563239 ZFP57Q9NU63 452 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 RABL2AQ9UBK7 228 aaPredicted RBP6.66□□□□□ -1.34
UBR1-204ENST00000563239 RABL2BQ9UNT1 228 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 DNAH3Q8TD57 4116 aa6.66□□□□□ -1.34
UBR1-204ENST00000563239 A0A1B0GW64 132 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 FABP12A6NFH5 140 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 E7EUB6 86 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 GPR31O00270 319 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 RLN1P04808 185 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 KIR2DS2P43631 304 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 CDX1P47902 265 aaPredicted RBP6.65□□□□□ -1.34
UBR1-204ENST00000563239 TAS2R19P59542 299 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 TSPAN5P62079 268 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 GNB1P62873 340 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 ZNF79Q15937 498 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 POU2AF1Q16633 256 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 ECSCRQ19T08 205 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 RNASE10Q5GAN6 216 aaKnown RBP6.65□□□□□ -1.34
UBR1-204ENST00000563239 CXorf66Q5JRM2 361 aaPredicted RBP6.65□□□□□ -1.34
UBR1-204ENST00000563239 FAAP20Q6NZ36 180 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 STEAP1BQ6NZ63 245 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 C8orf86Q6ZUL3 223 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 ARRDC1Q8N5I2 433 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 ZNF491Q8N8L2 437 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 WFDC9Q8NEX5 89 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 OR4F17Q8NGA8 305 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 OR51H1Q8NH63 302 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 GRPEL2Q8TAA5 225 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 TMEM167AQ8TBQ9 72 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 CASTOR1Q8WTX7 329 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 RHOVQ96L33 236 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 OR4F4Q96R69 305 aa6.65□□□□□ -1.34
UBR1-204ENST00000563239 FOXA2Q9Y261 457 aaPredicted RBP6.65□□□□□ -1.34
UBR1-204ENST00000563239 TNCP24821 2201 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 TRAV3A0A0B4J244 114 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 A0A1W2PN81 502 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 ANKRD20A5PA0PJZ0 165 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 MSGN1A6NI15 193 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 CGB1A6NKQ9 187 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 RBMXL2O75526 392 aaKnown RBP6.64□□□□□ -1.35
UBR1-204ENST00000563239 KBTBD11O94819 623 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 OR2A4O95047 310 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 S1PR2O95136 353 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 CNIH1O95406 144 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 RAB3DO95716 219 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 HPRT1P00492 218 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 MYOD1P15172 320 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 PI3P19957 117 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 F2RP25116 425 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 CHRNA7P36544 502 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 RAB9AP51151 201 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 TMEM267Q0VDI3 215 aaPredicted RBP6.64□□□□□ -1.35
UBR1-204ENST00000563239 CATR1Q13166 79 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 PHLDA2Q53GA4 152 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms