RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 GNG10P50151 68 aa17.56■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 RPL31P62899 125 aaKnown RBP17.56■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 FBXL19-AS1Q494R0 122 aa17.56■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 AKIRIN2Q53H80 203 aa17.56■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 UTF1Q5T230 341 aa17.56■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 C1orf229Q6ZS94 237 aaPredicted RBP17.56■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 C17orf112F2Z3M2 114 aa17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 ATXN7O15265 892 aaPredicted RBP17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 NDUFB3O43676 98 aa17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 IFNA1P01562 189 aa17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 SNRNP70P08621 437 aaKnown RBP17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 ELLP55199 621 aaPredicted RBP17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 FLI1Q01543 452 aaPredicted RBP17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 POU2AF1Q16633 256 aa17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 LRRC10Q5BKY1 277 aa17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 C15orf54Q8N8G6 183 aa17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 ZNF383Q8NA42 475 aa17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 CCL17Q92583 94 aa17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 RAB39BQ96DA2 213 aa17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 HEYLQ9NQ87 328 aaPredicted RBP17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 USF3Q68DE3 2245 aa17.55■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 ACACAQ13085 2346 aa17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 DSPP15924 2871 aaKnown RBP17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 TANC2Q9HCD6 1990 aa17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 B9A039 149 aa17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 ZNF726P1Q15940 193 aa17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 FAM122CQ6P4D5 195 aa17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 LCN15Q6UWW0 184 aa17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 ST6GALNAC3Q8NDV1 305 aa17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 RXFP4Q8TDU9 374 aa17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 ZNF714Q96N38 554 aa17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 AIFM2Q9BRQ8 373 aa17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 GGACTQ9BVM4 153 aa17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 TUBA4BQ9H853 241 aa17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 CISD1Q9NZ45 108 aaKnown RBP17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 GNG13Q9P2W3 67 aa17.54■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 MAP1LC3B2A6NCE7 125 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 C15orf61A6NNL5 157 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 SOX15O60248 233 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 IFNA10P01566 189 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 CHRNB4P30926 498 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 VDAC2P45880 294 aaPredicted RBP17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 PMS2P11Q13670 270 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 RTL8BQ17RB0 113 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 HEPN1Q6WQI6 88 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 VKORC1L1Q8N0U8 176 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 RHOVQ96L33 236 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 MAP1LC3BQ9GZQ8 125 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 SLC39A9Q9NUM3 307 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 FOXA2Q9Y261 457 aaPredicted RBP17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 MGAQ8IWI9 3026 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 DSCAML1Q8TD84 2053 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 TNFRSF13BO14836 293 aaPredicted RBP17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 MMP23AO75900 390 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 BCL2P10415 239 aa17.53■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 NDUFA2O43678 99 aa17.52■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 MDKP21741 143 aaPredicted RBP17.52■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 RAB11AP62491 216 aa17.52■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 OR4A47Q6IF82 309 aa17.52■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 ZCCHC14Q8WYQ9 949 aaKnown RBP17.52■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 NPCDR1Q9BY65 106 aa17.52■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 MLXQ9UH92 298 aa17.52■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 TCF19Q9Y242 345 aa17.52■□□□□ 0.4
VPS9D1-AS1-202ENST00000562866 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 HOXA1P49639 335 aaPredicted RBP17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 ENY2Q9NPA8 101 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 KAAG1Q9UBP8 84 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 PUS1Q9Y606 427 aaKnown RBP eCLIP17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 CTXND1A0A1B0GTU2 59 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 MPDU1O75352 247 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 CD1BP29016 333 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 HSPE1P61604 102 aaKnown RBP17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 FFAR4Q5NUL3 377 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 AVPI1Q5T686 147 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 TMEM200BQ69YZ2 307 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 ACSM6Q6P461 480 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 RBMS3Q6XE24 437 aaKnown RBP17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 ZNF833PQ6ZTB9 187 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 NEUROG1Q92886 237 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 P2RX4Q99571 388 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 ACTR3CQ9C0K3 210 aaPredicted RBP17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 SLC35D1Q9NTN3 355 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 TMEM14BQ9NUH8 114 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 PRNDQ9UKY0 176 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 WDR83OSQ9Y284 106 aa17.51■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 PLCE1Q9P212 2302 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 TRAV3A0A0B4J244 114 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 FAM90A27PA6NNH2 459 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 COLCA2A8K830 154 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 CCL21O00585 134 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 CT45A6P0DMU7 189 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 CT45A5P0DMU8 189 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 CT45A7P0DMV0 189 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 TAGLN2P37802 199 aaKnown RBP17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 RPS16P62249 146 aaKnown RBP17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 TFF3Q07654 80 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 ETV3LQ6ZN32 361 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 RPP25LQ8N5L8 163 aaKnown RBP17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 CYB561D1Q8N8Q1 229 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 OR10G9Q8NGN4 311 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms