RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 OR6Q1Q8NGQ2 317 aa13.12□□□□□ -0.31
CLK3-207ENST00000562389 OR51H1Q8NH63 302 aa13.12□□□□□ -0.31
CLK3-207ENST00000562389 CD300LFQ8TDQ1 290 aa13.12□□□□□ -0.31
CLK3-207ENST00000562389 FBXO7Q9Y3I1 522 aa13.12□□□□□ -0.31
CLK3-207ENST00000562389 TRAV41A0A0B4J266 112 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 ANKRD20A5PA0PJZ0 165 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 G3V318 75 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 ARPC1BO15143 372 aaKnown RBP13.11□□□□□ -0.31
CLK3-207ENST00000562389 RAMP3O60896 148 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 TSPAN15O95858 294 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 IGHG4P01861 327 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 RLN1P04808 185 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 ELANEP08246 267 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 ZNF735P0CB33 412 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 EGR2P11161 476 aaPredicted RBP13.11□□□□□ -0.31
CLK3-207ENST00000562389 ETV6P41212 452 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 SSBP2P81877 361 aaPredicted RBP13.11□□□□□ -0.31
CLK3-207ENST00000562389 FOXE3Q13461 319 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 FXYD3Q14802 87 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 ZNF79Q15937 498 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 MRGPRG-AS1Q2M3A8 158 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 TCTEX1D1Q8N7M0 179 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 RNF152Q8N8N0 203 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 POC5Q8NA72 575 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 ARPC1AQ92747 370 aa13.11□□□□□ -0.31
CLK3-207ENST00000562389 CREBL2O60519 120 aaPredicted RBP13.1□□□□□ -0.31
CLK3-207ENST00000562389 HPRT1P00492 218 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 HRASP01112 189 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 S100GP29377 79 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 PJVKQ0ZLH3 352 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 PRSS8Q16651 343 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 ECSCRQ19T08 205 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 PHLDA2Q53GA4 152 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 PYDC2Q56P42 97 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 SPANXN2Q5MJ10 180 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 TREML4Q6UXN2 200 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 IDO2Q6ZQW0 420 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 PUSL1Q8N0Z8 303 aaKnown RBP13.1□□□□□ -0.31
CLK3-207ENST00000562389 MINDY2Q8NBR6 621 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 OR4C16Q8NGL9 310 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 TERB2Q8NHR7 220 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 VSTM2AQ8TAG5 236 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 ABHD5Q8WTS1 349 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 TRIM63Q969Q1 353 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 ZNF486Q96H40 463 aaPredicted RBP13.1□□□□□ -0.31
CLK3-207ENST00000562389 AIFM2Q9BRQ8 373 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 THAP7Q9BT49 309 aaPredicted RBP13.1□□□□□ -0.31
CLK3-207ENST00000562389 ZFP57Q9NU63 452 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 NUBP2Q9Y5Y2 271 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 WSB1Q9Y6I7 421 aa13.1□□□□□ -0.31
CLK3-207ENST00000562389 TRRAPQ9Y4A5 3859 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 DISC1C4P0D8 188 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 F2RP25116 425 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 PSMB8P28062 276 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 TAS2R31P59538 309 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 RPL23AP62750 156 aaKnown RBP13.09□□□□□ -0.31
CLK3-207ENST00000562389 TMEM267Q0VDI3 215 aaPredicted RBP13.09□□□□□ -0.31
CLK3-207ENST00000562389 SCGB2B2Q4G0G5 96 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 AKIRIN2Q53H80 203 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 CXorf66Q5JRM2 361 aaPredicted RBP13.09□□□□□ -0.31
CLK3-207ENST00000562389 KHDC1LQ5JSQ8 128 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 FAAP20Q6NZ36 180 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 VKORC1L1Q8N0U8 176 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 Q8N402 240 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 RHOVQ96L33 236 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 FAM103A1Q9BTL3 118 aaKnown RBP13.09□□□□□ -0.31
CLK3-207ENST00000562389 PLEKHA2Q9HB19 425 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 COMMD9Q9P000 198 aa13.09□□□□□ -0.31
CLK3-207ENST00000562389 A0A1W2PRX2 142 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 A6NHS1 94 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 KBTBD11O94819 623 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 OR2A4O95047 310 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 CNIH1O95406 144 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 IGLV1-40P01703 118 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 PGAM2P15259 253 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 NQO2P16083 231 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 ECI1P42126 302 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 PPP5CP53041 499 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 RND3P61587 244 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 GNB1P62873 340 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 POU2AF1Q16633 256 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 TBC1D26Q86UD7 250 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 MMD2Q8IY49 270 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 OR4F17Q8NGA8 305 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 GRPEL2Q8TAA5 225 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 OR2A7Q96R45 310 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 OR4F4Q96R69 305 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 ZNF430Q9H8G1 570 aaPredicted RBP13.08□□□□□ -0.32
CLK3-207ENST00000562389 SLC2A9Q9NRM0 540 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 FAM212BQ9NTI7 297 aaPredicted RBP13.08□□□□□ -0.32
CLK3-207ENST00000562389 TNCP24821 2201 aa13.08□□□□□ -0.32
CLK3-207ENST00000562389 A0A1W2PN81 502 aa13.07□□□□□ -0.32
CLK3-207ENST00000562389 S1PR2O95136 353 aa13.07□□□□□ -0.32
CLK3-207ENST00000562389 RPLP1P05386 114 aaKnown RBP13.07□□□□□ -0.32
CLK3-207ENST00000562389 CHRNA7P36544 502 aa13.07□□□□□ -0.32
CLK3-207ENST00000562389 TNXAQ16473 311 aa13.07□□□□□ -0.32
CLK3-207ENST00000562389 UNQ5815/PRO19632Q6UWF5 114 aa13.07□□□□□ -0.32
CLK3-207ENST00000562389 LFNGQ8NES3 379 aa13.07□□□□□ -0.32
CLK3-207ENST00000562389 OR4A5Q8NH83 315 aa13.07□□□□□ -0.32
CLK3-207ENST00000562389 TMEM167AQ8TBQ9 72 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms