RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 TRBV6-6A0A0A6YYG2 114 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 C13orf42A0A1B0GVH6 325 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 PROP1O75360 226 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 BRI3O95415 125 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 IFNA6P05013 189 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 SNRPBP14678 240 aaKnown RBP9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 HTR2CP28335 458 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 FXYD3Q14802 87 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 C1orf100Q5SVJ3 147 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 GLT8D1Q68CQ7 371 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 OR10K2Q6IF99 312 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 IL34Q6ZMJ4 242 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 OR9G4Q8NGQ1 327 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 DEDD2Q8WXF8 326 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 PTX4Q96A99 478 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 S100A16Q96FQ6 103 aaKnown RBP9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 TMEM68Q96MH6 324 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 GFI1Q99684 422 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 THAP7Q9BT49 309 aaPredicted RBP9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 TM2D1Q9BX74 207 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 TMEM59Q9BXS4 323 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 PARP12Q9H0J9 701 aaKnown RBP9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 C11orf54Q9H0W9 315 aaPredicted RBP9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 RIMS4Q9H426 269 aaPredicted RBP9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 RHBDL2Q9NX52 303 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 SIGLEC8Q9NYZ4 499 aa9.03□□□□□ -0.96
CARMIL3-204ENST00000561354 DNAH1Q9P2D7 4330 aa9.02□□□□□ -0.96
CARMIL3-204ENST00000561354 CENPXA8MT69 81 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 SLC17A2O00624 439 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 LYRM1O43325 122 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 IGKV1-16P04430 117 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 TRAPPC2P0DI81 140 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 TRAPPC2BP0DI82 140 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 CD37P11049 281 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 ZBTB25P24278 435 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 CEACAM6P40199 344 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 AP3S2P59780 193 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 P2RY14Q15391 338 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 NRARPQ7Z6K4 114 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 PDPNQ86YL7 162 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 CADM3Q8N126 398 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 DRAXINQ8NBI3 349 aaPredicted RBP9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 KCNG3Q8TAE7 436 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 TRIM63Q969Q1 353 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 CHMP1AQ9HD42 196 aaPredicted RBP9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 ZNF355PQ9NSJ1 428 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 STARD9Q9P2P6 4700 aa9.02□□□□□ -0.97
CARMIL3-204ENST00000561354 A0A0A6YYH2 397 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 A6NJ64 397 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 TMEM14DPA8MWL7 114 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 JTBO76095 146 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 AADACP22760 399 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 RFX2P48378 723 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 RPS16P62249 146 aaKnown RBP9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 SSBP2P81877 361 aaPredicted RBP9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 UNC119Q13432 240 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 RAB11BQ15907 218 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 TATDN3Q17R31 274 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 HES5Q5TA89 166 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 ZNF57Q68EA5 555 aaPredicted RBP9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 LCN12Q6JVE5 192 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 PLET1Q6UQ28 207 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 GTSCR1Q86UQ5 136 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 ZNF383Q8NA42 475 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 DUSP18Q8NEJ0 188 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 OR5T1Q8NG75 326 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 OR6M1Q8NGM8 313 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 OR5H6Q8NGV6 325 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 GRPEL2Q8TAA5 225 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 IL17DQ8TAD2 202 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 SMIM4Q8WVI0 70 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 NEURL2Q9BR09 285 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 NICN1Q9BSH3 213 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 TUBA4BQ9H853 241 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 PLEKHJ1Q9NW61 149 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 OR1A1Q9P1Q5 309 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 COPZ2Q9P299 210 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 MGAT4AQ9UM21 535 aa9.01□□□□□ -0.97
CARMIL3-204ENST00000561354 TNCP24821 2201 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 ANKRD34BA5PLL1 514 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 GABARAPH6UMI1 98 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 PLA2G10O15496 165 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 SLC25A17O43808 307 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 SCGNO76038 276 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 CNIH1O95406 144 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 BPNT1O95861 308 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 APOA2P02652 100 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 CSN3P07498 182 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 SYNJ2BPP57105 145 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 HLA-DRB3P79483 266 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 QRFPP83859 136 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 DYRK1AQ13627 763 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 TMEM69Q5SWH9 247 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 ZNF343Q6P1L6 599 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 LINC00322Q6ZN03 302 aaPredicted RBP9□□□□□ -0.97
CARMIL3-204ENST00000561354 AKAP14Q86UN6 197 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 SLC25A38Q96DW6 304 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 ABHD1Q96SE0 405 aa9□□□□□ -0.97
CARMIL3-204ENST00000561354 TINAGL1Q9GZM7 467 aaPredicted RBP9□□□□□ -0.97
CARMIL3-204ENST00000561354 PEF1Q9UBV8 284 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms