RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 LGALS4P56470 323 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 LINC00205P59089 165 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 DHRS2Q13268 280 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 PPP1R1AQ13522 171 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 AARDQ4LEZ3 155 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 PHLDA2Q53GA4 152 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 RUSC1-AS1Q66K80 236 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 GLDNQ6ZMI3 551 aaPredicted RBP4.38□□□□□ -1.71
ZEB1-220ENST00000560909 LYG2Q86SG7 212 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 TBC1D26Q86UD7 250 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 PDPNQ86YL7 162 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 CCDC71LQ8N9Z2 235 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 RPEQ96AT9 228 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 TP53RKQ96S44 253 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 SMR3AQ99954 134 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 TMEM222Q9H0R3 208 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 PLEKHA2Q9HB19 425 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 YAE1D1Q9NRH1 226 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 PLSCR3Q9NRY6 295 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 C14orf166Q9Y224 244 aaKnown RBP4.38□□□□□ -1.71
ZEB1-220ENST00000560909 RBM7Q9Y580 266 aaKnown RBP4.38□□□□□ -1.71
ZEB1-220ENST00000560909 TNCP24821 2201 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 ATRQ13535 2644 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 TRAV6A0A075B6T7 132 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 PIGBOS1A0A0B4J2F0 54 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 A0A0U1RQK1 487 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 DUXBA0A1W2PPF3 345 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 A6NDX4 124 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 SRRM4A7MD48 611 aaKnown RBP4.37□□□□□ -1.71
ZEB1-220ENST00000560909 CLDN34H7C241 214 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 NDUFA3O95167 84 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 HPRT1P00492 218 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 IGLV2-23P01705 113 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 IGKV1-16P04430 117 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 FBP1P09467 338 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 SLC25A6P12236 298 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 IER3P46695 156 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 RAB13P51153 203 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 ARHGDIBP52566 201 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 SRPXP78539 464 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 SRSF4Q08170 494 aaKnown RBP4.37□□□□□ -1.71
ZEB1-220ENST00000560909 CATR1Q13166 79 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 SSX2Q16385 188 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 MRGPRG-AS1Q2M3A8 158 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 TRIM16LQ309B1 348 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 DEFB112Q30KQ8 113 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 ANKRD55Q3KP44 614 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 ABCA11PQ4W5N1 156 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 ANKRD39Q53RE8 183 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 NMSQ5H8A3 153 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 C11orf88Q6PI97 169 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 CLEC9AQ6UXN8 241 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 BRD3OSQ6XYD6 125 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 Q6YL49 198 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 SGPP2Q8IWX5 399 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 PDZD9Q8IXQ8 264 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 SELENOHQ8IZQ5 122 aaKnown RBP4.37□□□□□ -1.71
ZEB1-220ENST00000560909 SPAG16Q8N0X2 631 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 BCL6BQ8N143 479 aaPredicted RBP4.37□□□□□ -1.71
ZEB1-220ENST00000560909 TMEM86BQ8N661 226 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 DRAXINQ8NBI3 349 aaPredicted RBP4.37□□□□□ -1.71
ZEB1-220ENST00000560909 NPBQ8NG41 125 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 OR8H1Q8NGG4 311 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 OR4C13Q8NGP0 309 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 LHFPL5Q8TAF8 219 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 OSR1Q8TAX0 266 aaPredicted RBP4.37□□□□□ -1.71
ZEB1-220ENST00000560909 ZNF431Q8TF32 576 aaPredicted RBP4.37□□□□□ -1.71
ZEB1-220ENST00000560909 CHAC2Q8WUX2 184 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 CAPSLQ8WWF8 208 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 SEC22AQ96IW7 307 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 ZNF48Q96MX3 618 aaPredicted RBP4.37□□□□□ -1.71
ZEB1-220ENST00000560909 GPHA2Q96T91 129 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 LIN7CQ9NUP9 197 aaKnown RBP4.37□□□□□ -1.71
ZEB1-220ENST00000560909 COMMD9Q9P000 198 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 CDC42EP3Q9UKI2 254 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 KCNIP3Q9Y2W7 256 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 PRELID3BQ9Y3B1 194 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 WASHC3Q9Y3C0 194 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 HILPDAQ9Y5L2 63 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 SOX21Q9Y651 276 aaPredicted RBP4.37□□□□□ -1.71
ZEB1-220ENST00000560909 C2CD3Q4AC94 2353 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 ZFHX3Q15911 3703 aa4.37□□□□□ -1.71
ZEB1-220ENST00000560909 IGHV3OR16-10A0A075B7F0 116 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 A0A0A6YYJ9 748 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 A0A1W2PRD5 423 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 A0A1W2PRF3 423 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 A0A1W2PRM7 423 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 SHOXO15266 292 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 TNFSF12O43508 249 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 RAMP3O60896 148 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 PITX3O75364 302 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 CRLF1O75462 422 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 SPDEFO95238 335 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 DHFRP00374 187 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 MOSP00540 346 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 IFNA2P01563 188 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 IGKV1-5P01602 117 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 APOA2P02652 100 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 RLN1P04808 185 aa4.36□□□□□ -1.71
ZEB1-220ENST00000560909 OR5AC1P0C628 307 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms