RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 NUDT19A8MXV4 375 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 G3V4G9 280 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 RAMP3O60896 148 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 TPPPO94811 219 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 CHRNA7P36544 502 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 PRSS8Q16651 343 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 VMA21Q3ZAQ7 101 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 UNQ5815/PRO19632Q6UWF5 114 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 TEX45Q8NA69 505 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 ZBTB34Q8NCN2 500 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 OR6F1Q8NGZ6 308 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 MYOZ3Q8TDC0 251 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 ARPC1AQ92747 370 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 DIRAS2Q96HU8 199 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 C6orf62Q9GZU0 229 aaPredicted RBP9.42□□□□□ -0.9
USP8-212ENST00000560730 NXF2Q9GZY0 626 aaKnown RBP9.42□□□□□ -0.9
USP8-212ENST00000560730 MTFP1Q9UDX5 166 aa9.42□□□□□ -0.9
USP8-212ENST00000560730 CNIH1O95406 144 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 PF4P02776 101 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 CD3DP04234 171 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 CDX1P47902 265 aaPredicted RBP9.41□□□□□ -0.9
USP8-212ENST00000560730 RAB9AP51151 201 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 TSPAN5P62079 268 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 DEFB136Q30KP8 78 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 AKIRIN2Q53H80 203 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 OXLD1Q5BKU9 147 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 TMEM65Q6PI78 240 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 SPAG16Q8N0X2 631 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 ZNF491Q8N8L2 437 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 WFDC9Q8NEX5 89 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 OR51H1Q8NH63 302 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 OR4S2Q8NH73 311 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 MCFD2Q8NI22 146 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 FCAMRQ8WWV6 532 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 RAX2Q96IS3 184 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 TINAGL1Q9GZM7 467 aaPredicted RBP9.41□□□□□ -0.9
USP8-212ENST00000560730 ZNF430Q9H8G1 570 aaPredicted RBP9.41□□□□□ -0.9
USP8-212ENST00000560730 GNB4Q9HAV0 340 aa9.41□□□□□ -0.9
USP8-212ENST00000560730 FOXA2Q9Y261 457 aaPredicted RBP9.41□□□□□ -0.9
USP8-212ENST00000560730 GABARAPH6UMI1 98 aa9.4□□□□□ -0.9
USP8-212ENST00000560730 PGLYRP1O75594 196 aaPredicted RBP9.4□□□□□ -0.9
USP8-212ENST00000560730 TNFSF8P32971 234 aa9.4□□□□□ -0.9
USP8-212ENST00000560730 TMEM267Q0VDI3 215 aaPredicted RBP9.4□□□□□ -0.9
USP8-212ENST00000560730 TNXAQ16473 311 aa9.4□□□□□ -0.9
USP8-212ENST00000560730 ACTBL2Q562R1 376 aa9.4□□□□□ -0.9
USP8-212ENST00000560730 VAX1Q5SQQ9 334 aa9.4□□□□□ -0.9
USP8-212ENST00000560730 ASPHD1Q5U4P2 390 aa9.4□□□□□ -0.9
USP8-212ENST00000560730 MRPL41Q8IXM3 137 aaKnown RBP9.4□□□□□ -0.9
USP8-212ENST00000560730 PUSL1Q8N0Z8 303 aaKnown RBP9.4□□□□□ -0.9
USP8-212ENST00000560730 LINC00482Q8N8I6 264 aa9.4□□□□□ -0.9
USP8-212ENST00000560730 OR5T1Q8NG75 326 aa9.4□□□□□ -0.9
USP8-212ENST00000560730 OR4D10Q8NGI6 311 aa9.4□□□□□ -0.9
USP8-212ENST00000560730 MS4A10Q96PG2 267 aa9.4□□□□□ -0.9
USP8-212ENST00000560730 P2RX4Q99571 388 aa9.4□□□□□ -0.9
USP8-212ENST00000560730 MEGF8Q7Z7M0 2845 aa9.4□□□□□ -0.9
USP8-212ENST00000560730 MSGN1A6NI15 193 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 CCL24O00175 119 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 RLN1P04808 185 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 APELAP0DMC3 54 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 IGLL1P15814 213 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 CD33P20138 364 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 KIR2DS2P43631 304 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 DEFA6Q01524 100 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 IL18Q14116 193 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 PHLDA2Q53GA4 152 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 C10orf55Q5SWW7 151 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 SAMD5Q5TGI4 173 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 AADACL3Q5VUY0 350 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 SSX9Q7RTT3 188 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 C15orf40Q8WUR7 153 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 RHOVQ96L33 236 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 OR5B12Q96R08 314 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 SOSTQ9BQB4 213 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 RSL24D1Q9UHA3 163 aaKnown RBP9.39□□□□□ -0.91
USP8-212ENST00000560730 I3L521 148 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 GPR31O00270 319 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 RBFOX2O43251 390 aaKnown RBP eCLIP9.39□□□□□ -0.91
USP8-212ENST00000560730 S1PR2O95136 353 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 CD74P04233 296 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 SLC6A1P30531 599 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 MYCNOSP40205 109 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 CATR1Q13166 79 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 BEAN1Q3B7T3 259 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 RNASE10Q5GAN6 216 aaKnown RBP9.39□□□□□ -0.91
USP8-212ENST00000560730 PYHIN1Q6K0P9 492 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 TCTEX1D1Q8N7M0 179 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 TMEM229BQ8NBD8 167 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 SMIM4Q8WVI0 70 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 C4orf3Q8WVX3 66 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 SRSF12Q8WXF0 261 aaKnown RBP9.39□□□□□ -0.91
USP8-212ENST00000560730 UBE2E2Q96LR5 201 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 RSRP1Q9BUV0 290 aa9.39□□□□□ -0.91
USP8-212ENST00000560730 ALX4Q9H161 411 aaPredicted RBP9.39□□□□□ -0.91
USP8-212ENST00000560730 TRAV3A0A0B4J244 114 aa9.38□□□□□ -0.91
USP8-212ENST00000560730 A0A1B0GW64 132 aa9.38□□□□□ -0.91
USP8-212ENST00000560730 E7EUB6 86 aa9.38□□□□□ -0.91
USP8-212ENST00000560730 CTDSPLO15194 276 aa9.38□□□□□ -0.91
USP8-212ENST00000560730 KBTBD11O94819 623 aa9.38□□□□□ -0.91
USP8-212ENST00000560730 OR2A4O95047 310 aa9.38□□□□□ -0.91
USP8-212ENST00000560730 HRASP01112 189 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms