RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 MAP1LC3BQ9GZQ8 125 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 SLC39A9Q9NUM3 307 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 TMEM242Q9NWH2 141 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 FOXA2Q9Y261 457 aaPredicted RBP8.01□□□□□ -1.13
RTF1-206ENST00000560447 ZNF257Q9Y2Q1 563 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 MSRB2Q9Y3D2 182 aa8.01□□□□□ -1.13
RTF1-206ENST00000560447 CACNA1DQ01668 2161 aa8□□□□□ -1.13
RTF1-206ENST00000560447 SMCO3A2RU48 225 aa8□□□□□ -1.13
RTF1-206ENST00000560447 DPRXA6NFQ7 191 aa8□□□□□ -1.13
RTF1-206ENST00000560447 C15orf62A8K5M9 175 aa8□□□□□ -1.13
RTF1-206ENST00000560447 DEFB108AA8MXU0 73 aa8□□□□□ -1.13
RTF1-206ENST00000560447 SEC14L6B5MCN3 397 aa8□□□□□ -1.13
RTF1-206ENST00000560447 TMEM250H0YL14 139 aa8□□□□□ -1.13
RTF1-206ENST00000560447 H3BQ15 152 aa8□□□□□ -1.13
RTF1-206ENST00000560447 CYB5BO43169 146 aa8□□□□□ -1.13
RTF1-206ENST00000560447 IFNA17P01571 189 aa8□□□□□ -1.13
RTF1-206ENST00000560447 TFF1P04155 84 aa8□□□□□ -1.13
RTF1-206ENST00000560447 CRYBA1P05813 215 aa8□□□□□ -1.13
RTF1-206ENST00000560447 THBDP07204 575 aa8□□□□□ -1.13
RTF1-206ENST00000560447 IL6RP08887 468 aaPredicted RBP8□□□□□ -1.13
RTF1-206ENST00000560447 OR9G9P0C7N8 305 aa8□□□□□ -1.13
RTF1-206ENST00000560447 FGF7P21781 194 aa8□□□□□ -1.13
RTF1-206ENST00000560447 HOXA1P49639 335 aaPredicted RBP8□□□□□ -1.13
RTF1-206ENST00000560447 MRPS11P82912 194 aaKnown RBP8□□□□□ -1.13
RTF1-206ENST00000560447 TNP2Q05952 138 aa8□□□□□ -1.13
RTF1-206ENST00000560447 EFNB3Q15768 340 aa8□□□□□ -1.13
RTF1-206ENST00000560447 ZNF726P1Q15940 193 aa8□□□□□ -1.13
RTF1-206ENST00000560447 HAGHQ16775 308 aa8□□□□□ -1.13
RTF1-206ENST00000560447 FBXL19-AS1Q494R0 122 aa8□□□□□ -1.13
RTF1-206ENST00000560447 CT45A1Q5HYN5 189 aa8□□□□□ -1.13
RTF1-206ENST00000560447 WFDC8Q8IUA0 241 aa8□□□□□ -1.13
RTF1-206ENST00000560447 CISD2Q8N5K1 135 aaKnown RBP8□□□□□ -1.13
RTF1-206ENST00000560447 LINC00311Q8N616 119 aa8□□□□□ -1.13
RTF1-206ENST00000560447 CT45A3Q8NHU0 189 aa8□□□□□ -1.13
RTF1-206ENST00000560447 ZNF596Q8TC21 504 aa8□□□□□ -1.13
RTF1-206ENST00000560447 QTRT1Q9BXR0 403 aaKnown RBP8□□□□□ -1.13
RTF1-206ENST00000560447 NPCDR1Q9BY65 106 aa8□□□□□ -1.13
RTF1-206ENST00000560447 MS4A5Q9H3V2 200 aa8□□□□□ -1.13
RTF1-206ENST00000560447 ESRP2Q9H6T0 727 aaKnown RBP8□□□□□ -1.13
RTF1-206ENST00000560447 FKBP11Q9NYL4 201 aa8□□□□□ -1.13
RTF1-206ENST00000560447 KAAG1Q9UBP8 84 aa8□□□□□ -1.13
RTF1-206ENST00000560447 PRNDQ9UKY0 176 aa8□□□□□ -1.13
RTF1-206ENST00000560447 RFNGQ9Y644 331 aa8□□□□□ -1.13
RTF1-206ENST00000560447 URB1O60287 2271 aaKnown RBP7.99□□□□□ -1.13
RTF1-206ENST00000560447 PPIAL4EA0A075B759 164 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 PPIAL4DF5H284 164 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 OR4A8P0C604 315 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 PPIAL4FP0DN26 164 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 AGAP20933 346 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 CD1BP29016 333 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 OPRK1P41145 380 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 PSMB3P49720 205 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 ZNF134P52741 427 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 CASP6P55212 293 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 HSPE1P61604 102 aaKnown RBP7.99□□□□□ -1.13
RTF1-206ENST00000560447 BSPH1Q075Z2 132 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 RTL8BQ17RB0 113 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 SPRNQ5BIV9 151 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 PRR14LQ5THK1 2151 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 FAM53AQ6NSI3 398 aaPredicted RBP7.99□□□□□ -1.13
RTF1-206ENST00000560447 HEPN1Q6WQI6 88 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 TCF23Q7RTU1 214 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 RPP25LQ8N5L8 163 aaKnown RBP7.99□□□□□ -1.13
RTF1-206ENST00000560447 CYB561D1Q8N8Q1 229 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 OR10G9Q8NGN4 311 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 OR10G7Q8NGN6 311 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 OSR1Q8TAX0 266 aaPredicted RBP7.99□□□□□ -1.13
RTF1-206ENST00000560447 CA5BP1Q8WTZ4 195 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 LHX4Q969G2 390 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 CTDSP1Q9GZU7 261 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 TMEM14BQ9NUH8 114 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 TMEM140Q9NV12 185 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 GNG13Q9P2W3 67 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 PPIAL4AQ9Y536 164 aa7.99□□□□□ -1.13
RTF1-206ENST00000560447 SVILO95425 2214 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 SAA2-SAA4A0A096LPE2 208 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 PRSS46E5RG02 174 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 INS-IGF2F8WCM5 200 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 TMEM178BH3BS89 294 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 TNFRSF13BO14836 293 aaPredicted RBP7.98□□□□□ -1.13
RTF1-206ENST00000560447 ATXN7O15265 892 aaPredicted RBP7.98□□□□□ -1.13
RTF1-206ENST00000560447 OR2C1O95371 312 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 CYB5R3P00387 301 aaPredicted RBP7.98□□□□□ -1.13
RTF1-206ENST00000560447 SAA2P0DJI9 122 aaPredicted RBP7.98□□□□□ -1.13
RTF1-206ENST00000560447 RAB5AP20339 215 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 HOXA4Q00056 320 aaPredicted RBP7.98□□□□□ -1.13
RTF1-206ENST00000560447 MEF2BQ02080 365 aaPredicted RBP7.98□□□□□ -1.13
RTF1-206ENST00000560447 TLE1Q04724 770 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 SSX2Q16385 188 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 LTC4SQ16873 150 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 RPL39P5Q59GN2 51 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 FFAR4Q5NUL3 377 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 NCMAPQ5T1S8 102 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 SAMD5Q5TGI4 173 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 FAM90A2PQ658T7 463 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 ALKBH2Q6NS38 261 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 ACSM6Q6P461 480 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 LCN15Q6UWW0 184 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 ETV3LQ6ZN32 361 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 ZNF833PQ6ZTB9 187 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms