RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PJVKQ0ZLH3 352 aa13.21□□□□□ -0.29
RPL28-209ENST00000560055 PYDC2Q56P42 97 aa13.21□□□□□ -0.29
RPL28-209ENST00000560055 SPANXN2Q5MJ10 180 aa13.21□□□□□ -0.29
RPL28-209ENST00000560055 FAAP20Q6NZ36 180 aa13.21□□□□□ -0.29
RPL28-209ENST00000560055 SPAG16Q8N0X2 631 aa13.21□□□□□ -0.29
RPL28-209ENST00000560055 Q8N402 240 aa13.21□□□□□ -0.29
RPL28-209ENST00000560055 OR4C16Q8NGL9 310 aa13.21□□□□□ -0.29
RPL28-209ENST00000560055 OR51H1Q8NH63 302 aa13.21□□□□□ -0.29
RPL28-209ENST00000560055 MRGPRFQ96AM1 343 aa13.21□□□□□ -0.29
RPL28-209ENST00000560055 THAP7Q9BT49 309 aaPredicted RBP13.21□□□□□ -0.29
RPL28-209ENST00000560055 GON7Q9BXV9 100 aa13.21□□□□□ -0.29
RPL28-209ENST00000560055 PARP11Q9NR21 331 aa13.21□□□□□ -0.29
RPL28-209ENST00000560055 TET2Q6N021 2002 aaPredicted RBP13.21□□□□□ -0.29
RPL28-209ENST00000560055 G3V318 75 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 M0QZ24 198 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 ARPC1BO15143 372 aaKnown RBP13.2□□□□□ -0.3
RPL28-209ENST00000560055 IGHG4P01861 327 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 RLN1P04808 185 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 SAA1P0DJI8 122 aaPredicted RBP13.2□□□□□ -0.3
RPL28-209ENST00000560055 VDAC1P21796 283 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 PPIFP30405 207 aaKnown RBP13.2□□□□□ -0.3
RPL28-209ENST00000560055 SLC35B1P78383 322 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 C2orf68Q2NKX9 166 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 VMA21Q3ZAQ7 101 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 IDO2Q6ZQW0 420 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 NDUFA11Q86Y39 141 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 COMMD1Q8N668 190 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 RNF152Q8N8N0 203 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 TERB2Q8NHR7 220 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 CD300LFQ8TDQ1 290 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 CLCC1Q96S66 551 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 SRRQ9GZT4 340 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 NUBP2Q9Y5Y2 271 aa13.2□□□□□ -0.3
RPL28-209ENST00000560055 OPN1MWP04001 364 aa13.19□□□□□ -0.3
RPL28-209ENST00000560055 OPN1MW2P0DN77 364 aa13.19□□□□□ -0.3
RPL28-209ENST00000560055 OPN1MW3P0DN78 364 aa13.19□□□□□ -0.3
RPL28-209ENST00000560055 KLF9Q13886 244 aaPredicted RBP13.19□□□□□ -0.3
RPL28-209ENST00000560055 POU2AF1Q16633 256 aa13.19□□□□□ -0.3
RPL28-209ENST00000560055 PRSS8Q16651 343 aa13.19□□□□□ -0.3
RPL28-209ENST00000560055 PHLDA2Q53GA4 152 aa13.19□□□□□ -0.3
RPL28-209ENST00000560055 TEX38Q6PEX7 206 aa13.19□□□□□ -0.3
RPL28-209ENST00000560055 VKORC1L1Q8N0U8 176 aa13.19□□□□□ -0.3
RPL28-209ENST00000560055 PUSL1Q8N0Z8 303 aaKnown RBP13.19□□□□□ -0.3
RPL28-209ENST00000560055 MINDY2Q8NBR6 621 aa13.19□□□□□ -0.3
RPL28-209ENST00000560055 ZNF486Q96H40 463 aaPredicted RBP13.19□□□□□ -0.3
RPL28-209ENST00000560055 SLC2A9Q9NRM0 540 aa13.19□□□□□ -0.3
RPL28-209ENST00000560055 SLC2A8Q9NY64 477 aa13.19□□□□□ -0.3
RPL28-209ENST00000560055 WSB1Q9Y6I7 421 aa13.19□□□□□ -0.3
RPL28-209ENST00000560055 TRAV41A0A0B4J266 112 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 TCRBV4S1A1TA0A5B7 111 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 TSPAN15O95858 294 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 HPRT1P00492 218 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 HRASP01112 189 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 F2RP25116 425 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 PSMB8P28062 276 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 TAS2R31P59538 309 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 RND3P61587 244 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 FOXE3Q13461 319 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 FXYD3Q14802 87 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 SCGB2B2Q4G0G5 96 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 TCTEX1D1Q8N7M0 179 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 POC5Q8NA72 575 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 ARPC1AQ92747 370 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 RHOVQ96L33 236 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 ZNF430Q9H8G1 570 aaPredicted RBP13.18□□□□□ -0.3
RPL28-209ENST00000560055 PLEKHA2Q9HB19 425 aa13.18□□□□□ -0.3
RPL28-209ENST00000560055 FAM212BQ9NTI7 297 aaPredicted RBP13.18□□□□□ -0.3
RPL28-209ENST00000560055 TSSC4Q9Y5U2 329 aaPredicted RBP13.18□□□□□ -0.3
RPL28-209ENST00000560055 DISC1C4P0D8 188 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 OR2A4O95047 310 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 IGLV1-40P01703 118 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 ELANEP08246 267 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 PPP5CP53041 499 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 CNPY1Q3B7I2 92 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 ZNF585BQ52M93 769 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 AKIRIN2Q53H80 203 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 TBC1D26Q86UD7 250 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 OR51S1Q8NGJ8 323 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 OR13C8Q8NGS7 320 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 VSTM2AQ8TAG5 236 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 TMEM167AQ8TBQ9 72 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 OR2A7Q96R45 310 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 SDHCQ99643 169 aaPredicted RBP13.17□□□□□ -0.3
RPL28-209ENST00000560055 PRRT1Q99946 306 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 FAM103A1Q9BTL3 118 aaKnown RBP13.17□□□□□ -0.3
RPL28-209ENST00000560055 COMMD9Q9P000 198 aa13.17□□□□□ -0.3
RPL28-209ENST00000560055 WIPF1O43516 503 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 KBTBD11O94819 623 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 S1PR2O95136 353 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 IL6RP08887 468 aaPredicted RBP13.16□□□□□ -0.3
RPL28-209ENST00000560055 PGAM2P15259 253 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 NQO2P16083 231 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 PI3P19957 117 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 S100GP29377 79 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 ECI1P42126 302 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 PIGPP57054 158 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 GNB1P62873 340 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 SURF2Q15527 256 aaPredicted RBP13.16□□□□□ -0.3
RPL28-209ENST00000560055 ECSCRQ19T08 205 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 NSUN5P1Q3KNT7 163 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms