RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 CCL13Q99616 98 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 VKORC1Q9BQB6 163 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 QTRT1Q9BXR0 403 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 GYPAP02724 150 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 CD55P08174 381 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 OR4A8P0C604 315 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 RNF224P0DH78 156 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 TNFRSF1AP19438 455 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 KHDC3LQ587J8 217 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 SPINK9Q5DT21 86 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 PRAMEF5Q5TYX0 476 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 ZNF787Q6DD87 383 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 TCF23Q7RTU1 214 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 CENPVQ7Z7K6 275 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 RCC1LQ96I51 464 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 S1PR3Q99500 378 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 LOC102723971A0A1B0GUV8 181 aa11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 C17orf100A8MU93 164 aa11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 ELLP55199 621 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 OR2B8PP59922 312 aa11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 ERVK-16P61578 105 aa11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 CT45A1Q5HYN5 189 aa11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 UTF1Q5T230 341 aa11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 AVPI1Q5T686 147 aa11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 TGIF2LYQ8IUE0 185 aa11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 FAM216BQ8N7L0 139 aa11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 CT45A3Q8NHU0 189 aa11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 DDB2Q92466 427 aa11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 LEAP2Q969E1 77 aa11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 TUBA4BQ9H853 241 aa11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 SPTBN1Q01082 2364 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-212ENST00000559974 LY86O95711 162 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 CRYBA1P05813 215 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 NQO2P16083 231 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 CCL8P80075 99 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 LCN15Q6UWW0 184 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 SSX9Q7RTT3 188 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 SSX7Q7RTT5 188 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 DCAF16Q9NXF7 216 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 GNG13Q9P2W3 67 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 PUS1Q9Y606 427 aaKnown RBP eCLIP11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 DCHS2Q6V1P9 2916 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 GCN1Q92616 2671 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 SAA2-SAA4A0A096LPE2 208 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 ZNF729A6NN14 1252 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 IFNA17P01571 189 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 SAA2P0DJI9 122 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 GNB2P62879 340 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 VWC2Q2TAL6 325 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 C1orf229Q6ZS94 237 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 CYB561D1Q8N8Q1 229 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 OR4A16Q8NH70 328 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 OR4S2Q8NH73 311 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 CORO2AQ92828 525 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 LINC00574Q9H8X3 128 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 IDI2-AS1Q9NZ38 188 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 ROS1P08922 2347 aa11.92□□□□□ -0.5
RABGGTA-212ENST00000559974 A0A1W2PPE3 182 aa11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 DAOP14920 347 aa11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 FGF7P21781 194 aa11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 CEBPGP53567 150 aa11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 CASP6P55212 293 aa11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 SPCS3P61009 180 aa11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 TMEM30BQ3MIR4 351 aa11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 ZNF439Q8NDP4 499 aa11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 OR10G4Q8NGN3 311 aa11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 OR52E5Q8NH55 327 aa11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 RND1Q92730 232 aa11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 EGLN1Q9GZT9 426 aa11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 CISD1Q9NZ45 108 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 HELZ2Q9BYK8 2649 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 CRYBG3Q68DQ2 2970 aa11.91□□□□□ -0.5
RABGGTA-212ENST00000559974 MAP1LC3B2A6NCE7 125 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 NKX6-3A6NJ46 265 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 C15orf62A8K5M9 175 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 H3BQ15 152 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 FBP1P09467 338 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 BCL2P10415 239 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 FOLR2P14207 255 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 GRNP28799 593 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 FGF8P55075 233 aaPredicted RBP11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 RPS16P62249 146 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 SRSF1Q07955 248 aaKnown RBP eCLIP11.9□□□□□ -0.54e-7■□□□□ 9.3
RABGGTA-212ENST00000559974 PDLIM3Q53GG5 364 aaPredicted RBP11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 ADAM5Q6NVV9 412 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 VKORC1L1Q8N0U8 176 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 HIST1H2BAQ96A08 127 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 ZNF251Q9BRH9 671 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 MAP1LC3BQ9GZQ8 125 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 TMEM140Q9NV12 185 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 ZFP92A6NM28 416 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 FAM90A27PA6NNH2 459 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 IGKV1D-33P01593 117 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 IGKV1-33P01594 117 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 ARG1P05089 322 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 THBS3P49746 956 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 RELBQ01201 579 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 ACSM6Q6P461 480 aa11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 LYG1Q8N1E2 194 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms