RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 RND3P61587 244 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 GNB1P62873 340 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 ASAH1Q13510 395 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 TRIM16LQ309B1 348 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 MZT2BQ6NZ67 158 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 CENPSQ8N2Z9 138 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 FAM71E2Q8N5Q1 922 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 DMBX1Q8NFW5 382 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 OSR1Q8TAX0 266 aaPredicted RBP9.87□□□□□ -0.83
GABPB1-208ENST00000558970 ENKURQ8TC29 256 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 ABHD5Q8WTS1 349 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 R3HDM4Q96D70 268 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 HSPB9Q9BQS6 159 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 PRSS22Q9GZN4 317 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 C20orf85Q9H1P6 137 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 NAA60Q9H7X0 242 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 ZNF702PQ9H963 129 aa9.87□□□□□ -0.83
GABPB1-208ENST00000558970 CRYM-AS1A6NIL9 109 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 LINC01548A6NM66 108 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 H0Y980 276 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 M0QZK8 103 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 HAX1O00165 279 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 FCN1O00602 326 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 FGF16O43320 207 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 NDUFA3O95167 84 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 HPRT1P00492 218 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 CA2P00918 260 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 KRASP01116 189 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 SERPINE2P07093 398 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 ANXA7P20073 488 aaKnown RBP9.86□□□□□ -0.83
GABPB1-208ENST00000558970 VAMP1P23763 118 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 PJVKQ0ZLH3 352 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 C5orf64Q2M2E5 130 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 VMA21Q3ZAQ7 101 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 ZNF585BQ52M93 769 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 TET2Q6N021 2002 aaPredicted RBP9.86□□□□□ -0.83
GABPB1-208ENST00000558970 SGPP2Q8IWX5 399 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 NPBQ8NG41 125 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 SLC25A21Q9BQT8 299 aaPredicted RBP9.86□□□□□ -0.83
GABPB1-208ENST00000558970 NUDT15Q9NV35 164 aa9.86□□□□□ -0.83
GABPB1-208ENST00000558970 HRASP01112 189 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 IGKV1-39P01597 117 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 IGKV1D-39P04432 117 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 TCRBP04435 133 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 HKR1P10072 659 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 VDAC2P45880 294 aaPredicted RBP9.85□□□□□ -0.83
GABPB1-208ENST00000558970 LGALS7P47929 136 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 DEFA1P59665 94 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 DEFA3P59666 94 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 ERVK-16P61578 105 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 LIN54Q6MZP7 749 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 NRARPQ7Z6K4 114 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 SLC35E3Q7Z769 313 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 OR8H1Q8NGG4 311 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 OR2T6Q8NHC8 308 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 RNASE11Q8TAA1 199 aaKnown RBP9.85□□□□□ -0.83
GABPB1-208ENST00000558970 CASTOR1Q8WTX7 329 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 ZFAND2BQ8WV99 257 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 RHOVQ96L33 236 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 FAM103A1Q9BTL3 118 aaKnown RBP9.85□□□□□ -0.83
GABPB1-208ENST00000558970 RANBP3Q9H6Z4 567 aaPredicted RBP9.85□□□□□ -0.83
GABPB1-208ENST00000558970 PARP11Q9NR21 331 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 PLXNB1O43157 2135 aa9.85□□□□□ -0.83
GABPB1-208ENST00000558970 MARCH11A6NNE9 402 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 RBFOX2O43251 390 aaKnown RBP eCLIP9.84□□□□□ -0.83
GABPB1-208ENST00000558970 SPDEFO95238 335 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 OPN1MWP04001 364 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 APELAP0DMC3 54 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 OPN1MW2P0DN77 364 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 OPN1MW3P0DN78 364 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 MYOD1P15172 320 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 SLC6A1P30531 599 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 AKR1C2P52895 323 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 UBE2KP61086 200 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 RPL15P61313 204 aaKnown RBP9.84□□□□□ -0.83
GABPB1-208ENST00000558970 SUPT4H1P63272 117 aaKnown RBP9.84□□□□□ -0.83
GABPB1-208ENST00000558970 PPP1R1AQ13522 171 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 TNXAQ16473 311 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 IZUMO4Q1ZYL8 232 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 HIST2H2BDQ6DRA6 164 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 OR4A47Q6IF82 309 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 PPP1R27Q86WC6 154 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 OR4F5Q8NH21 305 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 LINC01006Q8NI28 216 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 GRPEL2Q8TAA5 225 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 CD300LFQ8TDQ1 290 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 NOL4LQ96MY1 436 aaPredicted RBP9.84□□□□□ -0.83
GABPB1-208ENST00000558970 RNF5Q99942 180 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 PLEKHA2Q9HB19 425 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 TMEM140Q9NV12 185 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 NSG2Q9Y328 171 aa9.84□□□□□ -0.83
GABPB1-208ENST00000558970 TRAV3A0A0B4J244 114 aa9.83□□□□□ -0.84
GABPB1-208ENST00000558970 KBTBD11O94819 623 aa9.83□□□□□ -0.84
GABPB1-208ENST00000558970 OR2A4O95047 310 aa9.83□□□□□ -0.84
GABPB1-208ENST00000558970 CNIH1O95406 144 aa9.83□□□□□ -0.84
GABPB1-208ENST00000558970 HLA-AP01891 365 aaKnown RBP9.83□□□□□ -0.84
GABPB1-208ENST00000558970 HLA-DRB1P01911 266 aa9.83□□□□□ -0.84
GABPB1-208ENST00000558970 NQO2P16083 231 aa9.83□□□□□ -0.84
GABPB1-208ENST00000558970 SPNP16150 400 aa9.83□□□□□ -0.84
GABPB1-208ENST00000558970 TAS2R31P59538 309 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms