RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 FOSL1P15407 271 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 COL8A2P25067 703 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 GPR6P46095 362 aaPredicted RBP6.33□□□□□ -1.4
LRRC28-211ENST00000558890 FLI1Q01543 452 aaPredicted RBP6.33□□□□□ -1.4
LRRC28-211ENST00000558890 COL10A1Q03692 680 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 DHRS7BQ6IAN0 325 aaPredicted RBP6.33□□□□□ -1.4
LRRC28-211ENST00000558890 FAM122CQ6P4D5 195 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 ZNF66Q6ZN08 573 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 ZNF788Q6ZQV5 615 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 LILRB2Q8N423 598 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 TMEM217Q8N7C4 229 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 OR52L2PQ8NGH6 319 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 MRGPRDQ8TDS7 321 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 TCTEX1D2Q8WW35 142 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 EDARADDQ8WWZ3 215 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 RAB39BQ96DA2 213 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 COQ2Q96H96 371 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 Q96MF0 132 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 TOLLIPQ9H0E2 274 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 SMDT1Q9H4I9 107 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 ZNF665Q9H7R5 613 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 UNKLQ9H9P5 680 aaKnown RBP6.33□□□□□ -1.4
LRRC28-211ENST00000558890 COA4Q9NYJ1 87 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 PSENENQ9NZ42 101 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 RNF150Q9ULK6 438 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 MMP24Q9Y5R2 645 aa6.33□□□□□ -1.4
LRRC28-211ENST00000558890 WNK2Q9Y3S1 2297 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 CR1P17927 2039 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 CUBNO60494 3623 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 TRBV23-1A0A0A0MS06 115 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 A0A1B0GW64 132 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 LYNX1G3V0Z9 82 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 H3BP45 60 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 IGKV1-5P01602 117 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 IGLV2-14P01704 120 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 H2AFB1P0C5Y9 115 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 LYNX1P0DP58 116 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 IAPPP10997 89 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 PRDX2P32119 198 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 NPBWR1P48145 328 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 AESQ08117 197 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 LOXL1Q08397 574 aaPredicted RBP6.32□□□□□ -1.4
LRRC28-211ENST00000558890 TMEM267Q0VDI3 215 aaPredicted RBP6.32□□□□□ -1.4
LRRC28-211ENST00000558890 EDDM3AQ14507 147 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 CLEC12BQ2HXU8 276 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 TMEM30BQ3MIR4 351 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 TMEM88Q6PEY1 159 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 ZNF525Q8N782 197 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 C8orf46Q8TAG6 207 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 CD300LFQ8TDQ1 290 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 RBMXL1Q96E39 390 aaKnown RBP6.32□□□□□ -1.4
LRRC28-211ENST00000558890 NEIL1Q96FI4 390 aaPredicted RBP6.32□□□□□ -1.4
LRRC28-211ENST00000558890 SNX22Q96L94 193 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 HSD17B10Q99714 261 aaKnown RBP6.32□□□□□ -1.4
LRRC28-211ENST00000558890 PATZ1Q9HBE1 687 aaKnown RBP6.32□□□□□ -1.4
LRRC28-211ENST00000558890 SMCO4Q9NRQ5 59 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 KIAA1456Q9P272 454 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 MLXQ9UH92 298 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 JPT1Q9UK76 154 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 ATRQ13535 2644 aa6.32□□□□□ -1.4
LRRC28-211ENST00000558890 IGKV1D-17A0A075B6S4 117 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 FAM157AC9JC47 383 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 M0R036 132 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 MGST3O14880 152 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 RAB29O14966 203 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 PPIHO43447 177 aaKnown RBP6.31□□□□□ -1.4
LRRC28-211ENST00000558890 ZNF737O75373 536 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 LY86O95711 162 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 TMEM50AO95807 157 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 CYB5R3P00387 301 aaPredicted RBP6.31□□□□□ -1.4
LRRC28-211ENST00000558890 IGKV1-39P01597 117 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 RBP4P02753 201 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 IGKV1D-39P04432 117 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 CD99P14209 185 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 EGR1P18146 543 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 GATA3P23771 443 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 PPP1CCP36873 323 aaKnown RBP6.31□□□□□ -1.4
LRRC28-211ENST00000558890 PAX9P55771 341 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 HTD2P86397 168 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 MEF2CQ06413 473 aaPredicted RBP6.31□□□□□ -1.4
LRRC28-211ENST00000558890 CR1LQ2VPA4 569 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 ZNF585BQ52M93 769 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 CBLN2Q8IUK8 224 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 OR8B3Q8NGG8 313 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 OR13A1Q8NGR1 328 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 CIB3Q96Q77 187 aaPredicted RBP6.31□□□□□ -1.4
LRRC28-211ENST00000558890 OR8B2Q96RD0 313 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 CLCC1Q96S66 551 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 SMR3AQ99954 134 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 PSMG3Q9BT73 122 aaPredicted RBP6.31□□□□□ -1.4
LRRC28-211ENST00000558890 BPESC1Q9GZL8 116 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 SLC35B3Q9H1N7 401 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 GSX1Q9H4S2 264 aaPredicted RBP6.31□□□□□ -1.4
LRRC28-211ENST00000558890 GNG12Q9UBI6 72 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 FBXO7Q9Y3I1 522 aa6.31□□□□□ -1.4
LRRC28-211ENST00000558890 DSCAML1Q8TD84 2053 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 A0A1B0GV50 99 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 A0A1W2PPH5 198 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 ODAMA1E959 279 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 KIAA1324LA8MWY0 1029 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms