RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 PSMB9P28065 219 aa10.29□□□□□ -0.76
VPS18-203ENST00000558855 GABARAPL2P60520 117 aa10.29□□□□□ -0.76
VPS18-203ENST00000558855 RTL8BQ17RB0 113 aa10.29□□□□□ -0.76
VPS18-203ENST00000558855 TEX45Q8NA69 505 aa10.29□□□□□ -0.76
VPS18-203ENST00000558855 ACOT12Q8WYK0 555 aa10.29□□□□□ -0.76
VPS18-203ENST00000558855 SLC25A38Q96DW6 304 aa10.29□□□□□ -0.76
VPS18-203ENST00000558855 ST6GALNAC5Q9BVH7 336 aa10.29□□□□□ -0.76
VPS18-203ENST00000558855 PEF1Q9UBV8 284 aaKnown RBP10.29□□□□□ -0.76
VPS18-203ENST00000558855 RBM7Q9Y580 266 aaKnown RBP10.29□□□□□ -0.76
VPS18-203ENST00000558855 TRBV9A0A0B4J1U6 114 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 NOTOA8MTQ0 251 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 FCGR3BO75015 233 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 HLA-DQB1P01920 261 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 OR9G9P0C7N8 305 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 ZP3P21754 424 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 FGF9P31371 208 aaPredicted RBP10.28□□□□□ -0.76
VPS18-203ENST00000558855 HSPA13P48723 471 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 MECP2P51608 486 aaKnown RBP10.28□□□□□ -0.76
VPS18-203ENST00000558855 EXOSC2Q13868 293 aaKnown RBP10.28□□□□□ -0.76
VPS18-203ENST00000558855 CDK10Q15131 360 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 HACD4Q5VWC8 232 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 KCTD9Q7L273 389 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 ANKRD13BQ86YJ7 626 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 ZNF645Q8N7E2 425 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 PHB2Q99623 299 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 EDA2RQ9HAV5 297 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 RETNQ9HD89 108 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 DAPK2Q9UIK4 370 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 RAB26Q9ULW5 256 aa10.28□□□□□ -0.76
VPS18-203ENST00000558855 RBMX2Q9Y388 322 aaKnown RBP10.28□□□□□ -0.76
VPS18-203ENST00000558855 A0A0G2JLM5 398 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 METTL21EPA6NDL7 271 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 CGB1A6NKQ9 187 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 PPP5D1E7EU14 171 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 TUSC2O75896 110 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 ATP6V1G2O95670 118 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 HLA-AP01891 365 aaKnown RBP10.27□□□□□ -0.77
VPS18-203ENST00000558855 FCER2P06734 321 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 IL6RP08887 468 aaPredicted RBP10.27□□□□□ -0.77
VPS18-203ENST00000558855 RRASP10301 218 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 GALP22466 123 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 CD40LGP29965 261 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 TGFBR1P36897 503 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 TALDO1P37837 337 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 RHOGP84095 191 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 VMA21Q3ZAQ7 101 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 ZFAND6Q6FIF0 208 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 GVQW1Q8N7I0 195 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 ELOVL1Q9BW60 279 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 WFDC10AQ9H1F0 79 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 BLOC1S6Q9UL45 172 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 RRP15Q9Y3B9 282 aaKnown RBP10.27□□□□□ -0.77
VPS18-203ENST00000558855 OR2W1Q9Y3N9 320 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 S4R3C0 116 aa10.27□□□□□ -0.77
VPS18-203ENST00000558855 A8MZ25 164 aa10.26□□□□□ -0.77
VPS18-203ENST00000558855 OR2J3O76001 311 aa10.26□□□□□ -0.77
VPS18-203ENST00000558855 IGHV3-23P01764 117 aa10.26□□□□□ -0.77
VPS18-203ENST00000558855 AADACP22760 399 aa10.26□□□□□ -0.77
VPS18-203ENST00000558855 SDC2P34741 201 aa10.26□□□□□ -0.77
VPS18-203ENST00000558855 MXD1Q05195 221 aa10.26□□□□□ -0.77
VPS18-203ENST00000558855 HAGHQ16775 308 aa10.26□□□□□ -0.77
VPS18-203ENST00000558855 SFXN4Q6P4A7 337 aa10.26□□□□□ -0.77
VPS18-203ENST00000558855 ZNF773Q6PK81 442 aa10.26□□□□□ -0.77
VPS18-203ENST00000558855 PUSL1Q8N0Z8 303 aaKnown RBP10.26□□□□□ -0.77
VPS18-203ENST00000558855 OSR1Q8TAX0 266 aaPredicted RBP10.26□□□□□ -0.77
VPS18-203ENST00000558855 ADTRPQ96IZ2 230 aa10.26□□□□□ -0.77
VPS18-203ENST00000558855 CITED4Q96RK1 184 aa10.26□□□□□ -0.77
VPS18-203ENST00000558855 VCX3BQ9H321 246 aa10.26□□□□□ -0.77
VPS18-203ENST00000558855 AREGP15514 252 aa10.25□□□□□ -0.77
VPS18-203ENST00000558855 CBX3Q13185 183 aa10.25□□□□□ -0.77
VPS18-203ENST00000558855 TTC9CQ8N5M4 171 aa10.25□□□□□ -0.77
VPS18-203ENST00000558855 CACNG8Q8WXS5 425 aa10.25□□□□□ -0.77
VPS18-203ENST00000558855 USMG5Q96IX5 58 aa10.25□□□□□ -0.77
VPS18-203ENST00000558855 TMEM68Q96MH6 324 aa10.25□□□□□ -0.77
VPS18-203ENST00000558855 FANCD2OSQ96PS1 177 aa10.25□□□□□ -0.77
VPS18-203ENST00000558855 RHBDL2Q9NX52 303 aa10.25□□□□□ -0.77
VPS18-203ENST00000558855 TAS2R8Q9NYW2 309 aa10.25□□□□□ -0.77
VPS18-203ENST00000558855 ANXA10Q9UJ72 324 aa10.25□□□□□ -0.77
VPS18-203ENST00000558855 SPATA2Q9UM82 520 aa10.25□□□□□ -0.77
VPS18-203ENST00000558855 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.24□□□□□ -0.77
VPS18-203ENST00000558855 ZNF785A8K8V0 405 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 MPPED1O15442 326 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 TNFSF12O43508 249 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 KBTBD11O94819 623 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 NDUFB8O95169 186 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 RPEL1Q2QD12 228 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 CNIH2Q6PI25 160 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 SSX9Q7RTT3 188 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 TCTEX1D2Q8WW35 142 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 SNAPC3Q92966 411 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 CCDC140Q96MF4 163 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 DCUN1D5Q9BTE7 237 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 CENPOQ9BU64 300 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 PLEKHA3Q9HB20 300 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 CCL28Q9NRJ3 127 aa10.24□□□□□ -0.77
VPS18-203ENST00000558855 TRAV3A0A0B4J244 114 aa10.23□□□□□ -0.77
VPS18-203ENST00000558855 FAM223BA6NKX1 122 aa10.23□□□□□ -0.77
VPS18-203ENST00000558855 OR2A4O95047 310 aa10.23□□□□□ -0.77
VPS18-203ENST00000558855 REG1AP05451 166 aa10.23□□□□□ -0.77
VPS18-203ENST00000558855 CD7P09564 240 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms