RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 EIF4EBP1Q13541 118 aaPredicted RBP11.95□□□□□ -0.5
CSHL1-208ENST00000558609 PRSS8Q16651 343 aa11.95□□□□□ -0.5
CSHL1-208ENST00000558609 KCTD9Q7L273 389 aa11.95□□□□□ -0.5
CSHL1-208ENST00000558609 GVQW1Q8N7I0 195 aa11.95□□□□□ -0.5
CSHL1-208ENST00000558609 HSD17B10Q99714 261 aaKnown RBP11.95□□□□□ -0.5
CSHL1-208ENST00000558609 B9D2Q9BPU9 175 aa11.95□□□□□ -0.5
CSHL1-208ENST00000558609 ZNF355PQ9NSJ1 428 aa11.95□□□□□ -0.5
CSHL1-208ENST00000558609 LSM4Q9Y4Z0 139 aaKnown RBP11.95□□□□□ -0.5
CSHL1-208ENST00000558609 SORL1Q92673 2214 aa11.95□□□□□ -0.5
CSHL1-208ENST00000558609 DNAH9Q9NYC9 4486 aa11.94□□□□□ -0.5
CSHL1-208ENST00000558609 A0A0G2JLM5 398 aa11.94□□□□□ -0.5
CSHL1-208ENST00000558609 MSGN1A6NI15 193 aa11.94□□□□□ -0.5
CSHL1-208ENST00000558609 XRCC3O43542 346 aa11.94□□□□□ -0.5
CSHL1-208ENST00000558609 AADACP22760 399 aa11.94□□□□□ -0.5
CSHL1-208ENST00000558609 ARPC4P59998 168 aa11.94□□□□□ -0.5
CSHL1-208ENST00000558609 CD69Q07108 199 aa11.94□□□□□ -0.5
CSHL1-208ENST00000558609 RAB2BQ8WUD1 216 aa11.94□□□□□ -0.5
CSHL1-208ENST00000558609 PRR25Q96S07 402 aa11.94□□□□□ -0.5
CSHL1-208ENST00000558609 ZNF256Q9Y2P7 627 aaPredicted RBP11.94□□□□□ -0.5
CSHL1-208ENST00000558609 MRPS7Q9Y2R9 242 aaKnown RBP11.94□□□□□ -0.5
CSHL1-208ENST00000558609 C13orf42A0A1B0GVH6 325 aa11.93□□□□□ -0.5
CSHL1-208ENST00000558609 CREBL2O60519 120 aaPredicted RBP11.93□□□□□ -0.5
CSHL1-208ENST00000558609 SAA1P0DJI8 122 aaPredicted RBP11.93□□□□□ -0.5
CSHL1-208ENST00000558609 CBX5P45973 191 aa11.93□□□□□ -0.5
CSHL1-208ENST00000558609 LSM3P62310 102 aaKnown RBP11.93□□□□□ -0.5
CSHL1-208ENST00000558609 CDK10Q15131 360 aa11.93□□□□□ -0.5
CSHL1-208ENST00000558609 MSMO1Q15800 293 aa11.93□□□□□ -0.5
CSHL1-208ENST00000558609 TNXAQ16473 311 aa11.93□□□□□ -0.5
CSHL1-208ENST00000558609 ACSM6Q6P461 480 aa11.93□□□□□ -0.5
CSHL1-208ENST00000558609 IDO2Q6ZQW0 420 aa11.93□□□□□ -0.5
CSHL1-208ENST00000558609 ANKRD13BQ86YJ7 626 aa11.93□□□□□ -0.5
CSHL1-208ENST00000558609 MFSD4AQ8N468 514 aa11.93□□□□□ -0.5
CSHL1-208ENST00000558609 ISOC1Q96CN7 298 aa11.93□□□□□ -0.5
CSHL1-208ENST00000558609 S100A16Q96FQ6 103 aaKnown RBP11.93□□□□□ -0.5
CSHL1-208ENST00000558609 DCUN1D5Q9BTE7 237 aa11.93□□□□□ -0.5
CSHL1-208ENST00000558609 TINAGL1Q9GZM7 467 aaPredicted RBP11.93□□□□□ -0.5
CSHL1-208ENST00000558609 ZNF430Q9H8G1 570 aaPredicted RBP11.93□□□□□ -0.5
CSHL1-208ENST00000558609 RANGRFQ9HD47 186 aaPredicted RBP11.93□□□□□ -0.5
CSHL1-208ENST00000558609 SAP30O75446 220 aa11.92□□□□□ -0.5
CSHL1-208ENST00000558609 PTHLHP12272 177 aa11.92□□□□□ -0.5
CSHL1-208ENST00000558609 FCGR2CP31995 323 aa11.92□□□□□ -0.5
CSHL1-208ENST00000558609 BRWD1-AS2P59051 145 aa11.92□□□□□ -0.5
CSHL1-208ENST00000558609 CNPY1Q3B7I2 92 aa11.92□□□□□ -0.5
CSHL1-208ENST00000558609 UBE2NLQ5JXB2 153 aa11.92□□□□□ -0.5
CSHL1-208ENST00000558609 VAX1Q5SQQ9 334 aa11.92□□□□□ -0.5
CSHL1-208ENST00000558609 ZNF66Q6ZN08 573 aa11.92□□□□□ -0.5
CSHL1-208ENST00000558609 MMD2Q8IY49 270 aa11.92□□□□□ -0.5
CSHL1-208ENST00000558609 OR4S2Q8NH73 311 aa11.92□□□□□ -0.5
CSHL1-208ENST00000558609 SRSF12Q8WXF0 261 aaKnown RBP11.92□□□□□ -0.5
CSHL1-208ENST00000558609 PHB2Q99623 299 aa11.92□□□□□ -0.5
CSHL1-208ENST00000558609 NAA50Q9GZZ1 169 aaKnown RBP11.92□□□□□ -0.5
CSHL1-208ENST00000558609 ZNF701M0R085 212 aaPredicted RBP11.91□□□□□ -0.5
CSHL1-208ENST00000558609 ACTL6BO94805 426 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 PPYP01298 95 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 OR9G9P0C7N8 305 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 OR2B11Q5JQS5 317 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 ZBTB34Q8NCN2 500 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 ADAD2Q8NCV1 583 aaKnown RBP11.91□□□□□ -0.5
CSHL1-208ENST00000558609 OR5AP2Q8NGF4 316 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 TCTEX1D2Q8WW35 142 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 GIMAP1Q8WWP7 306 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 ACOT12Q8WYK0 555 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 SNAPC3Q92966 411 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 USMG5Q96IX5 58 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 SPIN2AQ99865 258 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 SPIN2BQ9BPZ2 258 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 BCL7BQ9BQE9 202 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 RBM38Q9H0Z9 239 aaKnown RBP11.91□□□□□ -0.5
CSHL1-208ENST00000558609 CCL28Q9NRJ3 127 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 COA4Q9NYJ1 87 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 TAS2R8Q9NYW2 309 aa11.91□□□□□ -0.5
CSHL1-208ENST00000558609 TENM3Q9P273 2699 aa11.9□□□□□ -0.5
CSHL1-208ENST00000558609 APELAP0DMC3 54 aa11.9□□□□□ -0.5
CSHL1-208ENST00000558609 ZP3P21754 424 aa11.9□□□□□ -0.5
CSHL1-208ENST00000558609 KIR2DS2P43631 304 aa11.9□□□□□ -0.5
CSHL1-208ENST00000558609 ZNF343Q6P1L6 599 aa11.9□□□□□ -0.5
CSHL1-208ENST00000558609 VKORC1L1Q8N0U8 176 aa11.9□□□□□ -0.5
CSHL1-208ENST00000558609 PUSL1Q8N0Z8 303 aaKnown RBP11.9□□□□□ -0.5
CSHL1-208ENST00000558609 SAMD12Q8N8I0 201 aa11.9□□□□□ -0.5
CSHL1-208ENST00000558609 VSTM2AQ8TAG5 236 aa11.9□□□□□ -0.5
CSHL1-208ENST00000558609 SECTM1Q8WVN6 248 aa11.9□□□□□ -0.5
CSHL1-208ENST00000558609 SLC25A46Q96AG3 418 aa11.9□□□□□ -0.5
CSHL1-208ENST00000558609 KCTD12Q96CX2 325 aaKnown RBP11.9□□□□□ -0.5
CSHL1-208ENST00000558609 ANKRD34BA5PLL1 514 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 H3BMQ9 156 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 KBTBD11O94819 623 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 OR2A4O95047 310 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 GABARAPO95166 117 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 FCER2P06734 321 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 NHLRC4P0CG21 123 aaPredicted RBP11.89□□□□□ -0.51
CSHL1-208ENST00000558609 VBP1P61758 197 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 DYRK1AQ13627 763 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 KLF5Q13887 457 aaPredicted RBP11.89□□□□□ -0.51
CSHL1-208ENST00000558609 TMEM69Q5SWH9 247 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 C11orf87Q6NUJ2 197 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 TTC9CQ8N5M4 171 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 OR6Q1Q8NGQ2 317 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 TMEM167AQ8TBQ9 72 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 OR2A7Q96R45 310 aa11.89□□□□□ -0.51
CSHL1-208ENST00000558609 OR4C12Q96R67 309 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms