RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 SPAG16Q8N0X2 631 aa12.2□□□□□ -0.46
LINC01220-201ENST00000558575 GDPD1Q8N9F7 314 aa12.2□□□□□ -0.46
LINC01220-201ENST00000558575 OR51S1Q8NGJ8 323 aa12.2□□□□□ -0.46
LINC01220-201ENST00000558575 HARBI1Q96MB7 349 aa12.2□□□□□ -0.46
LINC01220-201ENST00000558575 HRASLSQ9HDD0 168 aa12.2□□□□□ -0.46
LINC01220-201ENST00000558575 METTL1Q9UBP6 276 aaKnown RBP12.2□□□□□ -0.46
LINC01220-201ENST00000558575 DISC1C4P0D8 188 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 SPDEFO95238 335 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 EGR2P11161 476 aaPredicted RBP12.19□□□□□ -0.46
LINC01220-201ENST00000558575 CX3CL1P78423 397 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 NDPQ00604 133 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 ZNF45Q02386 682 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 SCGB2B2Q4G0G5 96 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 ZNF585BQ52M93 769 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 LPCAT3Q6P1A2 487 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 LINC00299Q6ZSB3 139 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 SLC38A6Q8IZM9 456 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 OR51H1Q8NH63 302 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 OSR1Q8TAX0 266 aaPredicted RBP12.19□□□□□ -0.46
LINC01220-201ENST00000558575 MARCH1Q8TCQ1 289 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 CLCC1Q96S66 551 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 PTTG2Q9NZH5 202 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 KIAA1456Q9P272 454 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 FBXO7Q9Y3I1 522 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 TNCP24821 2201 aa12.19□□□□□ -0.46
LINC01220-201ENST00000558575 RBFOX2O43251 390 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC01220-201ENST00000558575 RLN1P04808 185 aa12.18□□□□□ -0.46
LINC01220-201ENST00000558575 PPP5CP53041 499 aa12.18□□□□□ -0.46
LINC01220-201ENST00000558575 UBE2KP61086 200 aa12.18□□□□□ -0.46
LINC01220-201ENST00000558575 ARSJQ5FYB0 599 aaPredicted RBP12.18□□□□□ -0.46
LINC01220-201ENST00000558575 TCTEX1D4Q5JR98 221 aa12.18□□□□□ -0.46
LINC01220-201ENST00000558575 CMTM1Q8IZ96 169 aa12.18□□□□□ -0.46
LINC01220-201ENST00000558575 VKORC1L1Q8N0U8 176 aa12.18□□□□□ -0.46
LINC01220-201ENST00000558575 TOMM5Q8N4H5 51 aa12.18□□□□□ -0.46
LINC01220-201ENST00000558575 C11orf44Q8N8P7 122 aa12.18□□□□□ -0.46
LINC01220-201ENST00000558575 BORCS5Q969J3 196 aa12.18□□□□□ -0.46
LINC01220-201ENST00000558575 RTBDNQ9BSG5 229 aaPredicted RBP12.18□□□□□ -0.46
LINC01220-201ENST00000558575 OR51J1Q9H342 316 aa12.18□□□□□ -0.46
LINC01220-201ENST00000558575 SLC2A8Q9NY64 477 aa12.18□□□□□ -0.46
LINC01220-201ENST00000558575 GPR132Q9UNW8 380 aa12.18□□□□□ -0.46
LINC01220-201ENST00000558575 ARPC1BO15143 372 aaKnown RBP12.17□□□□□ -0.46
LINC01220-201ENST00000558575 IGF1P05019 195 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 SAA1P0DJI8 122 aaPredicted RBP12.17□□□□□ -0.46
LINC01220-201ENST00000558575 CD28P10747 220 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 PGAM2P15259 253 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 F2RP25116 425 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 KIR2DS2P43631 304 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 RND3P61587 244 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 CATR1Q13166 79 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 C2orf68Q2NKX9 166 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 ZNF562Q6V9R5 426 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 IDO2Q6ZQW0 420 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 CENPVQ7Z7K6 275 aaPredicted RBP12.17□□□□□ -0.46
LINC01220-201ENST00000558575 ZNF329Q86UD4 541 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 TBC1D26Q86UD7 250 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 PPP1R27Q86WC6 154 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 STPG2Q8N412 459 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 TEX45Q8NA69 505 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 OR5AU1Q8NGC0 362 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 OR4S2Q8NH73 311 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 SLC2A9Q9NRM0 540 aa12.17□□□□□ -0.46
LINC01220-201ENST00000558575 AP4M1O00189 453 aa12.16□□□□□ -0.46
LINC01220-201ENST00000558575 ATP6V0E1O15342 81 aa12.16□□□□□ -0.46
LINC01220-201ENST00000558575 MPPED1O15442 326 aa12.16□□□□□ -0.46
LINC01220-201ENST00000558575 CA2P00918 260 aa12.16□□□□□ -0.46
LINC01220-201ENST00000558575 CTSDP07339 412 aaPredicted RBP12.16□□□□□ -0.46
LINC01220-201ENST00000558575 IL6RP08887 468 aaPredicted RBP12.16□□□□□ -0.46
LINC01220-201ENST00000558575 LPAR6P43657 344 aa12.16□□□□□ -0.46
LINC01220-201ENST00000558575 PIGPP57054 158 aa12.16□□□□□ -0.46
LINC01220-201ENST00000558575 CFHR3Q02985 330 aa12.16□□□□□ -0.46
LINC01220-201ENST00000558575 CBX3Q13185 183 aa12.16□□□□□ -0.46
LINC01220-201ENST00000558575 PLGLAQ15195 96 aa12.16□□□□□ -0.46
LINC01220-201ENST00000558575 PUSL1Q8N0Z8 303 aaKnown RBP12.16□□□□□ -0.46
LINC01220-201ENST00000558575 ZNF486Q96H40 463 aaPredicted RBP12.16□□□□□ -0.46
LINC01220-201ENST00000558575 PRRT1Q99946 306 aa12.16□□□□□ -0.46
LINC01220-201ENST00000558575 C5orf66Q9H5L9 145 aa12.16□□□□□ -0.46
LINC01220-201ENST00000558575 MCUBQ9NWR8 336 aa12.16□□□□□ -0.46
LINC01220-201ENST00000558575 WSB1Q9Y6I7 421 aa12.16□□□□□ -0.46
LINC01220-201ENST00000558575 G3V318 75 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 S1PR2O95136 353 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 HPRT1P00492 218 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 IL7P13232 177 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 AP3S2P59780 193 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 POU2AF1Q16633 256 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 PRSS8Q16651 343 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 VMA21Q3ZAQ7 101 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 C19orf54Q5BKX5 351 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 ZNF57Q68EA5 555 aaPredicted RBP12.15□□□□□ -0.46
LINC01220-201ENST00000558575 FOXRED2Q8IWF2 684 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 ZFAND1Q8TCF1 268 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 RHOVQ96L33 236 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 PLEKHA2Q9HB19 425 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 AURKAIP1Q9NWT8 199 aaPredicted RBP12.15□□□□□ -0.46
LINC01220-201ENST00000558575 ZNF580Q9UK33 172 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 VSIG4Q9Y279 399 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 NUBP2Q9Y5Y2 271 aa12.15□□□□□ -0.46
LINC01220-201ENST00000558575 DNAH9Q9NYC9 4486 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 RYR2Q92736 4967 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 TRAV3A0A0B4J244 114 aa12.14□□□□□ -0.47
LINC01220-201ENST00000558575 PSMB11A5LHX3 300 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms