RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 FBXO7Q9Y3I1 522 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 IGHV4OR15-8A0A075B7B6 117 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 MEIS3P1A6NDR6 274 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 BTBD17A6NE02 478 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 TRIM64CA6NLI5 447 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 NCBP2LA6PVI3 153 aaKnown RBP3.3□□□□□ -1.88
SPG11-211ENST00000558561 SRRM4A7MD48 611 aaKnown RBP3.3□□□□□ -1.88
SPG11-211ENST00000558561 SERPINE3A8MV23 424 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 MFNGO00587 321 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 HSD17B6O14756 317 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 OR2F2O95006 317 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 GAPDHP04406 335 aaKnown RBP3.3□□□□□ -1.88
SPG11-211ENST00000558561 SAA2P0DJI9 122 aaPredicted RBP3.3□□□□□ -1.88
SPG11-211ENST00000558561 MAPK3P27361 379 aaPredicted RBP3.3□□□□□ -1.88
SPG11-211ENST00000558561 FGF9P31371 208 aaPredicted RBP3.3□□□□□ -1.88
SPG11-211ENST00000558561 KCNJ3P48549 501 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 NCS1P62166 190 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 RPL30P62888 115 aaKnown RBP3.3□□□□□ -1.88
SPG11-211ENST00000558561 DEFA6Q01524 100 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 ZNF816Q0VGE8 651 aaPredicted RBP3.3□□□□□ -1.88
SPG11-211ENST00000558561 PJVKQ0ZLH3 352 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 KIAA0141Q14154 515 aaPredicted RBP3.3□□□□□ -1.88
SPG11-211ENST00000558561 AANATQ16613 207 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 MRGPRG-AS1Q2M3A8 158 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 IDNKQ5T6J7 187 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 OR2W3Q7Z3T1 314 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 CENPVQ7Z7K6 275 aaPredicted RBP3.3□□□□□ -1.88
SPG11-211ENST00000558561 NKAIN3Q8N8D7 197 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 C5orf56Q8N8D9 126 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 ZNF383Q8NA42 475 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 TSPAN14Q8NG11 270 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 OR52M1Q8NGK5 317 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 OR10R2Q8NGX6 335 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 OR10X1Q8NGY0 326 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 SGMS2Q8NHU3 365 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 LGALS14Q8TCE9 139 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 TOMM40LQ969M1 308 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 RPEQ96AT9 228 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 SLC25A38Q96DW6 304 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 CLCC1Q96S66 551 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 CMSS1Q9BQ75 279 aaKnown RBP3.3□□□□□ -1.88
SPG11-211ENST00000558561 ST6GALNAC5Q9BVH7 336 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 IFI27L2Q9H2X8 130 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 ZNF696Q9H7X3 374 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 CHMP1AQ9HD42 196 aaPredicted RBP3.3□□□□□ -1.88
SPG11-211ENST00000558561 GNG12Q9UBI6 72 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 GHRLQ9UBU3 117 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 ZNF107Q9UII5 783 aaPredicted RBP3.3□□□□□ -1.88
SPG11-211ENST00000558561 SPATA2Q9UM82 520 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 STUB1Q9UNE7 303 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 WSB1Q9Y6I7 421 aa3.3□□□□□ -1.88
SPG11-211ENST00000558561 TRAV18A0A075B6X5 111 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 TRBV6-6A0A0A6YYG2 114 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 IGKV1D-13A0A0B4J2D9 117 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 TMEM235A6NFC5 223 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 IFITM10A6NMD0 228 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 A8MZ25 164 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 TRDCB7Z8K6 153 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 FAM90A26D6RGX4 464 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 E7EUB6 86 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 BET1O15155 118 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 YPEL1O60688 119 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 MRPS14O60783 128 aaKnown RBP3.29□□□□□ -1.88
SPG11-211ENST00000558561 ARL6IP5O75915 188 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 TFAP2AP05549 437 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 GLAP06280 429 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 OR8U9P0C7N5 309 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 UBBP0CG47 229 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 IGKV1-13P0DP09 117 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 IGLL1P15814 213 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 TMEM11P17152 192 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 ANXA7P20073 488 aaKnown RBP3.29□□□□□ -1.88
SPG11-211ENST00000558561 NFYAP23511 347 aaPredicted RBP3.29□□□□□ -1.88
SPG11-211ENST00000558561 PSMA1P25786 263 aaKnown RBP3.29□□□□□ -1.88
SPG11-211ENST00000558561 CD1BP29016 333 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 BRS3P32247 399 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 VDAC2P45880 294 aaPredicted RBP3.29□□□□□ -1.88
SPG11-211ENST00000558561 VBP1P61758 197 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 HLA-DRB3P79483 266 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 RPL36AP83881 106 aaKnown RBP3.29□□□□□ -1.88
SPG11-211ENST00000558561 HTD2P86397 168 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 NDPQ00604 133 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 DEFA5Q01523 94 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 TRAM1Q15629 374 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 DEFB136Q30KP8 78 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 KCTD21Q4G0X4 260 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 SFXN4Q6P4A7 337 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 FAM131AQ6UXB0 335 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 ZNF833PQ6ZTB9 187 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 LINC00596Q86U02 117 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 OR10A7Q8NGE5 316 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 OR4C13Q8NGP0 309 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 OR8U1Q8NH10 309 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 OR2T6Q8NHC8 308 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 GALMQ96C23 342 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 RAB3CQ96E17 227 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 YPEL2Q96QA6 119 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 S1PR3Q99500 378 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 SRSF8Q9BRL6 282 aaKnown RBP3.29□□□□□ -1.88
SPG11-211ENST00000558561 FAM103A1Q9BTL3 118 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms