RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 HAX1O00165 279 aa13.81□□□□□ -0.2
TPM1-214ENST00000558544 HLA-DRB1P01911 266 aa13.81□□□□□ -0.2
TPM1-214ENST00000558544 VSIG10L2P0DP72 767 aa13.81□□□□□ -0.2
TPM1-214ENST00000558544 F2RP25116 425 aa13.81□□□□□ -0.2
TPM1-214ENST00000558544 C12orf54Q6X4T0 127 aa13.81□□□□□ -0.2
TPM1-214ENST00000558544 SLC35E3Q7Z769 313 aa13.81□□□□□ -0.2
TPM1-214ENST00000558544 CLCC1Q96S66 551 aa13.81□□□□□ -0.2
TPM1-214ENST00000558544 C5orf66Q9H5L9 145 aa13.81□□□□□ -0.2
TPM1-214ENST00000558544 COPZ2Q9P299 210 aa13.81□□□□□ -0.2
TPM1-214ENST00000558544 GPR132Q9UNW8 380 aa13.81□□□□□ -0.2
TPM1-214ENST00000558544 VSIG4Q9Y279 399 aa13.81□□□□□ -0.2
TPM1-214ENST00000558544 NAP1L6A6NFF2 107 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 LINC01548A6NM66 108 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 MPPED1O15442 326 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 RBFOX2O43251 390 aaKnown RBP eCLIP13.8□□□□□ -0.2
TPM1-214ENST00000558544 S1PR2O95136 353 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 IGHG2P01859 326 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 SAA1P0DJI8 122 aaPredicted RBP13.8□□□□□ -0.2
TPM1-214ENST00000558544 SPNP16150 400 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 PROK1P58294 105 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 DEFA1P59665 94 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 DEFA3P59666 94 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 OXA1LQ15070 435 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 VMA21Q3ZAQ7 101 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 LIN54Q6MZP7 749 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 VKORC1L1Q8N0U8 176 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 CCDC71LQ8N9Z2 235 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 CD300LFQ8TDQ1 290 aa13.8□□□□□ -0.2
TPM1-214ENST00000558544 RTBDNQ9BSG5 229 aaPredicted RBP13.8□□□□□ -0.2
TPM1-214ENST00000558544 FCN1O00602 326 aa13.79□□□□□ -0.2
TPM1-214ENST00000558544 HPRT1P00492 218 aa13.79□□□□□ -0.2
TPM1-214ENST00000558544 CA2P00918 260 aa13.79□□□□□ -0.2
TPM1-214ENST00000558544 CRYGBP07316 175 aa13.79□□□□□ -0.2
TPM1-214ENST00000558544 CCR6P51684 374 aa13.79□□□□□ -0.2
TPM1-214ENST00000558544 UBE2KP61086 200 aa13.79□□□□□ -0.2
TPM1-214ENST00000558544 SSX9Q7RTT3 188 aa13.79□□□□□ -0.2
TPM1-214ENST00000558544 KLHDC1Q8N7A1 406 aa13.79□□□□□ -0.2
TPM1-214ENST00000558544 C7orf50Q9BRJ6 194 aaKnown RBP13.79□□□□□ -0.2
TPM1-214ENST00000558544 LINC00527Q9UJ94 153 aa13.79□□□□□ -0.2
TPM1-214ENST00000558544 TNCP24821 2201 aa13.78□□□□□ -0.2
TPM1-214ENST00000558544 IGHV7-81A0A0B4J1V7 117 aa13.78□□□□□ -0.2
TPM1-214ENST00000558544 CENPXA8MT69 81 aa13.78□□□□□ -0.2
TPM1-214ENST00000558544 KCNAB3O43448 404 aa13.78□□□□□ -0.2
TPM1-214ENST00000558544 PTTG1O95997 202 aa13.78□□□□□ -0.2
TPM1-214ENST00000558544 LPAR6P43657 344 aa13.78□□□□□ -0.2
TPM1-214ENST00000558544 ZNF585BQ52M93 769 aa13.78□□□□□ -0.2
TPM1-214ENST00000558544 Q6ZNX1 250 aa13.78□□□□□ -0.2
TPM1-214ENST00000558544 PPP1R27Q86WC6 154 aa13.78□□□□□ -0.2
TPM1-214ENST00000558544 TCTEX1D1Q8N7M0 179 aa13.78□□□□□ -0.2
TPM1-214ENST00000558544 WFDC12Q8WWY7 111 aa13.78□□□□□ -0.2
TPM1-214ENST00000558544 NOL4LQ96MY1 436 aaPredicted RBP13.78□□□□□ -0.2
TPM1-214ENST00000558544 SCGB3A2Q96PL1 93 aa13.78□□□□□ -0.2
TPM1-214ENST00000558544 PLEKHA2Q9HB19 425 aa13.78□□□□□ -0.2
TPM1-214ENST00000558544 HRASP01112 189 aa13.77□□□□□ -0.21
TPM1-214ENST00000558544 BTCP35070 178 aa13.77□□□□□ -0.21
TPM1-214ENST00000558544 TAS2R31P59538 309 aa13.77□□□□□ -0.21
TPM1-214ENST00000558544 NDPQ00604 133 aa13.77□□□□□ -0.21
TPM1-214ENST00000558544 PJVKQ0ZLH3 352 aa13.77□□□□□ -0.21
TPM1-214ENST00000558544 TRIM16LQ309B1 348 aa13.77□□□□□ -0.21
TPM1-214ENST00000558544 FOXRED2Q8IWF2 684 aa13.77□□□□□ -0.21
TPM1-214ENST00000558544 TEX45Q8NA69 505 aa13.77□□□□□ -0.21
TPM1-214ENST00000558544 MINDY2Q8NBR6 621 aa13.77□□□□□ -0.21
TPM1-214ENST00000558544 ADAD2Q8NCV1 583 aaKnown RBP13.77□□□□□ -0.21
TPM1-214ENST00000558544 RHOVQ96L33 236 aa13.77□□□□□ -0.21
TPM1-214ENST00000558544 TP53RKQ96S44 253 aa13.77□□□□□ -0.21
TPM1-214ENST00000558544 PARP11Q9NR21 331 aa13.77□□□□□ -0.21
TPM1-214ENST00000558544 COMMD9Q9P000 198 aa13.77□□□□□ -0.21
TPM1-214ENST00000558544 C3orf85A0A1B0GTC6 90 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 H0Y980 276 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 AP4M1O00189 453 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 LYRM1O43325 122 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 RPA2P15927 270 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 NQO2P16083 231 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 KRTAP10-3P60369 221 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 GNB1P62873 340 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 CX3CL1P78423 397 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 RBMS2Q15434 407 aaKnown RBP13.76□□□□□ -0.21
TPM1-214ENST00000558544 MRGPRG-AS1Q2M3A8 158 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 TMED4Q7Z7H5 227 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 C3orf56Q8N813 242 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 TMEM230Q96A57 120 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 R3HDM4Q96D70 268 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 SLC25A21Q9BQT8 299 aaPredicted RBP13.76□□□□□ -0.21
TPM1-214ENST00000558544 WNT10AQ9GZT5 417 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 OR51J1Q9H342 316 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 NAA60Q9H7X0 242 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 FAM212BQ9NTI7 297 aaPredicted RBP13.76□□□□□ -0.21
TPM1-214ENST00000558544 DNHD1Q96M86 4753 aa13.76□□□□□ -0.21
TPM1-214ENST00000558544 TET2Q6N021 2002 aaPredicted RBP13.76□□□□□ -0.21
TPM1-214ENST00000558544 TEX13DA0A0J9YY54 714 aaPredicted RBP13.75□□□□□ -0.21
TPM1-214ENST00000558544 CRYM-AS1A6NIL9 109 aa13.75□□□□□ -0.21
TPM1-214ENST00000558544 ATP6V0E1O15342 81 aa13.75□□□□□ -0.21
TPM1-214ENST00000558544 KBTBD11O94819 623 aa13.75□□□□□ -0.21
TPM1-214ENST00000558544 OR2A4O95047 310 aa13.75□□□□□ -0.21
TPM1-214ENST00000558544 SRSF4Q08170 494 aaKnown RBP13.75□□□□□ -0.21
TPM1-214ENST00000558544 SP6Q3SY56 376 aa13.75□□□□□ -0.21
TPM1-214ENST00000558544 OR4A47Q6IF82 309 aa13.75□□□□□ -0.21
TPM1-214ENST00000558544 NRARPQ7Z6K4 114 aa13.75□□□□□ -0.21
TPM1-214ENST00000558544 PUSL1Q8N0Z8 303 aaKnown RBP13.75□□□□□ -0.21
TPM1-214ENST00000558544 STPG2Q8N412 459 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms