RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 NRARPQ7Z6K4 114 aa10.16□□□□□ -0.78
SHMT2-227ENST00000557269 POC5Q8NA72 575 aa10.16□□□□□ -0.78
SHMT2-227ENST00000557269 CLCC1Q96S66 551 aa10.16□□□□□ -0.78
SHMT2-227ENST00000557269 TSNAXQ99598 290 aaKnown RBP10.16□□□□□ -0.78
SHMT2-227ENST00000557269 HSPB9Q9BQS6 159 aa10.16□□□□□ -0.78
SHMT2-227ENST00000557269 NPFFR1Q9GZQ6 430 aa10.16□□□□□ -0.78
SHMT2-227ENST00000557269 PLEKHA2Q9HB19 425 aa10.16□□□□□ -0.78
SHMT2-227ENST00000557269 TRAV6A0A075B6T7 132 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 FAM240BA0A1B0GVZ2 78 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 M0QZK8 103 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 TSPAN9O75954 239 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 SAA1P0DJI8 122 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-227ENST00000557269 UBE2KP61086 200 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 RPL15P61313 204 aaKnown RBP10.15□□□□□ -0.78
SHMT2-227ENST00000557269 SSBP2P81877 361 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-227ENST00000557269 DHODHQ02127 395 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 PPP1R1AQ13522 171 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 TMEM95Q3KNT9 176 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 C9orf152Q5JTZ5 239 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 LIN54Q6MZP7 749 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 SLC25A42Q86VD7 318 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 Q8N2B8 174 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 CENPSQ8N2Z9 138 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 LHFPL5Q8TAF8 219 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 CD300LFQ8TDQ1 290 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 GLYATL2Q8WU03 294 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 R3HDM4Q96D70 268 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 RASL11BQ9BPW5 248 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 C20orf85Q9H1P6 137 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 BEX1Q9HBH7 125 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 NUDT15Q9NV35 164 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 KIAA1456Q9P272 454 aa10.15□□□□□ -0.78
SHMT2-227ENST00000557269 C2CD3Q4AC94 2353 aa10.15□□□□□ -0.79
SHMT2-227ENST00000557269 FBN1P35555 2871 aaKnown RBP10.14□□□□□ -0.79
SHMT2-227ENST00000557269 TRAV3A0A0B4J244 114 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 NDUFA7O95182 113 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 SPDEFO95238 335 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 KRASP01116 189 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 HKR1P10072 659 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 UCP1P25874 307 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 G6PCP35575 357 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 RAG2P55895 527 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 RIPPLY3P57055 190 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 TAS2R31P59538 309 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 TMEM187Q14656 261 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 TMEM128Q5BJH2 165 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 OR4A47Q6IF82 309 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 SGPP2Q8IWX5 399 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 PUSL1Q8N0Z8 303 aaKnown RBP10.14□□□□□ -0.79
SHMT2-227ENST00000557269 TCTEX1D1Q8N7M0 179 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 TEX45Q8NA69 505 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 RHOVQ96L33 236 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 PRSS22Q9GZN4 317 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 TMEM222Q9H0R3 208 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 C16orf95Q9H693 158 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 RANBP3Q9H6Z4 567 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-227ENST00000557269 FAM212BQ9NTI7 297 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-227ENST00000557269 SERTAD4Q9NUC0 356 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 COMMD9Q9P000 198 aa10.14□□□□□ -0.79
SHMT2-227ENST00000557269 IGHV7-81A0A0B4J1V7 117 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 CDS2O95674 445 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 CA2P00918 260 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 HRASP01112 189 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 IGKV1-5P01602 117 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 SERPINE2P07093 398 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 IL6RP08887 468 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-227ENST00000557269 NQO2P16083 231 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 MDKP21741 143 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-227ENST00000557269 RAB25P57735 213 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 DEFA1P59665 94 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 DEFA3P59666 94 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 NDPQ00604 133 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 PLGLAQ15195 96 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 POU2AF1Q16633 256 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 PRSS8Q16651 343 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 IZUMO4Q1ZYL8 232 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 ANKRD55Q3KP44 614 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 VMA21Q3ZAQ7 101 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 PPP1R27Q86WC6 154 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 SELENOHQ8IZQ5 122 aaKnown RBP10.13□□□□□ -0.79
SHMT2-227ENST00000557269 DUSP18Q8NEJ0 188 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 LINC01006Q8NI28 216 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 ENKURQ8TC29 256 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 GALNT14Q96FL9 552 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 SEC22AQ96IW7 307 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 C19orf24Q9BVV8 132 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 ZNF430Q9H8G1 570 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-227ENST00000557269 TMEM140Q9NV12 185 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 FBXO7Q9Y3I1 522 aa10.13□□□□□ -0.79
SHMT2-227ENST00000557269 C9orf170A2RU37 121 aa10.12□□□□□ -0.79
SHMT2-227ENST00000557269 TMEM89A2RUT3 159 aa10.12□□□□□ -0.79
SHMT2-227ENST00000557269 MARCH11A6NNE9 402 aa10.12□□□□□ -0.79
SHMT2-227ENST00000557269 KBTBD11O94819 623 aa10.12□□□□□ -0.79
SHMT2-227ENST00000557269 OR2A4O95047 310 aa10.12□□□□□ -0.79
SHMT2-227ENST00000557269 SFT2D2O95562 160 aa10.12□□□□□ -0.79
SHMT2-227ENST00000557269 IGHG2P01859 326 aa10.12□□□□□ -0.79
SHMT2-227ENST00000557269 HLA-DRB1P01911 266 aa10.12□□□□□ -0.79
SHMT2-227ENST00000557269 H2AFB2P0C5Z0 115 aa10.12□□□□□ -0.79
SHMT2-227ENST00000557269 OR4E1P0C645 316 aa10.12□□□□□ -0.79
SHMT2-227ENST00000557269 OR9G9P0C7N8 305 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms