RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 C5orf64Q2M2E5 130 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 KRTAP24-1Q3LI83 254 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 FAM71E2Q8N5Q1 922 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 DMBX1Q8NFW5 382 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 NPBQ8NG41 125 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 PRSS22Q9GZN4 317 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 BEX1Q9HBH7 125 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 TPSG1Q9NRR2 321 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 NUDT15Q9NV35 164 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 SETD2Q9BYW2 2564 aaPredicted RBP11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 NDUFA3O95167 84 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 SPDEFO95238 335 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 HRASP01112 189 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 KRASP01116 189 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 SAA1P0DJI8 122 aaPredicted RBP11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 ANXA7P20073 488 aaKnown RBP11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 ERVK-16P61578 105 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 ZNF585BQ52M93 769 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 LIN54Q6MZP7 749 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 Q6ZS46 218 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 Q6ZSV7 163 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 TCTEX1D1Q8N7M0 179 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 R3HDM4Q96D70 268 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 RHOVQ96L33 236 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 PLEKHA2Q9HB19 425 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 PRR13Q9NZ81 148 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 KCNIP3Q9Y2W7 256 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 SIGLEC9Q9Y336 463 aa11.16□□□□□ -0.62
VIPAS39-208ENST00000556412 NQO2P16083 231 aa11.15□□□□□ -0.62
VIPAS39-208ENST00000556412 G6PCP35575 357 aa11.15□□□□□ -0.62
VIPAS39-208ENST00000556412 RAB25P57735 213 aa11.15□□□□□ -0.62
VIPAS39-208ENST00000556412 TAS2R31P59538 309 aa11.15□□□□□ -0.62
VIPAS39-208ENST00000556412 UBE2KP61086 200 aa11.15□□□□□ -0.62
VIPAS39-208ENST00000556412 GNB1P62873 340 aa11.15□□□□□ -0.62
VIPAS39-208ENST00000556412 NRARPQ7Z6K4 114 aa11.15□□□□□ -0.62
VIPAS39-208ENST00000556412 ZNF702PQ9H963 129 aa11.15□□□□□ -0.62
VIPAS39-208ENST00000556412 JMJD1CQ15652 2540 aa11.15□□□□□ -0.62
VIPAS39-208ENST00000556412 ANXA3P12429 323 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 PPP1R1AQ13522 171 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 DCTN2Q13561 401 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 TMEM95Q3KNT9 176 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 C4orf46Q504U0 113 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 TMEM128Q5BJH2 165 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 OR2T6Q8NHC8 308 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 CASTOR1Q8WTX7 329 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 RANBP3Q9H6Z4 567 aaPredicted RBP11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 COMMD9Q9P000 198 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 MARCH11A6NNE9 402 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 FCN1O00602 326 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 CA2P00918 260 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 SUPT4H1P63272 117 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 SLC25A42Q86VD7 318 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 PPP1R27Q86WC6 154 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 OR4F5Q8NH21 305 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 RNASE11Q8TAA1 199 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 VSTM2AQ8TAG5 236 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 ABHD5Q8WTS1 349 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 TMEM158Q8WZ71 300 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 HSPB9Q9BQS6 159 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 AIFM2Q9BRQ8 373 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 C19orf24Q9BVV8 132 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 TMEM222Q9H0R3 208 aa11.14□□□□□ -0.63
VIPAS39-208ENST00000556412 B3GALNT1O75752 331 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 OR2A4O95047 310 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 IGKV1-39P01597 117 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 HLA-AP01891 365 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 IGKV1D-39P04432 117 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 H2AFB2P0C5Z0 115 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 HKR1P10072 659 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 UCP1P25874 307 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 AKR1C2P52895 323 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 DHODHQ02127 395 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 PJVKQ0ZLH3 352 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 OR4A47Q6IF82 309 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 SLC35E3Q7Z769 313 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 ZNF695Q8IW36 515 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 TEX45Q8NA69 505 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 GLYATL2Q8WU03 294 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 OR2A7Q96R45 310 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 PALMDQ9NP74 551 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 TMEM140Q9NV12 185 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 NUBP2Q9Y5Y2 271 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 ZFHX3Q15911 3703 aa11.13□□□□□ -0.63
VIPAS39-208ENST00000556412 TSPAN9O75954 239 aa11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 KBTBD11O94819 623 aa11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 NDUFA7O95182 113 aa11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 CNIH1O95406 144 aa11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 HLA-DRB1P01911 266 aa11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 MDKP21741 143 aaPredicted RBP11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 VDAC2P45880 294 aaPredicted RBP11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 TMEM268Q5VZI3 342 aa11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 PLET1Q6UQ28 207 aa11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 GALNT14Q96FL9 552 aa11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 PARP11Q9NR21 331 aa11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 FAM212BQ9NTI7 297 aaPredicted RBP11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 LINC00527Q9UJ94 153 aa11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 LINC01548A6NM66 108 aa11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 ACTL6BO94805 426 aa11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 SFT2D2O95562 160 aa11.12□□□□□ -0.63
VIPAS39-208ENST00000556412 CRYGBP07316 175 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms