RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SLC35G3Q8N808 338 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 TEX45Q8NA69 505 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 OR8H1Q8NGG4 311 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 OR5M8Q8NGP6 311 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 OR1S1Q8NH92 325 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 C2orf50Q96LR7 162 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 OR2A7Q96R45 310 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 TMUB1Q9BVT8 246 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 ZNF436Q9C0F3 470 aaPredicted RBP7.43□□□□□ -1.22
ACTN1-218ENST00000556343 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.43□□□□□ -1.22
ACTN1-218ENST00000556343 CSMD1Q96PZ7 3565 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 ITPR3Q14573 2671 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 ABCA1O95477 2261 aa7.43□□□□□ -1.22
ACTN1-218ENST00000556343 A0A1B0GVG6 124 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 WRBO00258 174 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 MED6O75586 246 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 CCNKO75909 580 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 ACTL6BO94805 426 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 VENTXO95231 258 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 LY86O95711 162 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 FSHBP01225 129 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 IGKV1D-33P01593 117 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 IGKV1-33P01594 117 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 GIPP09681 153 aaPredicted RBP7.42□□□□□ -1.22
ACTN1-218ENST00000556343 G6PCP35575 357 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 LINC00205P59089 165 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 UBE2KP61086 200 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 RAP2BP61225 183 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 FGL1Q08830 312 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 EBI3Q14213 229 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 SMCO1Q147U7 214 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 PLGLAQ15195 96 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 POU2AF1Q16633 256 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 IAH1Q2TAA2 248 aaPredicted RBP7.42□□□□□ -1.22
ACTN1-218ENST00000556343 CLEC9AQ6UXN8 241 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 OR5R1Q8NH85 324 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 CFHR4Q92496 578 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 GPR146Q96CH1 333 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 SEC22AQ96IW7 307 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 RHOVQ96L33 236 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 CLCC1Q96S66 551 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 SSX3Q99909 188 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 NMES1Q9C002 83 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 RANBP3Q9H6Z4 567 aaPredicted RBP7.42□□□□□ -1.22
ACTN1-218ENST00000556343 BET1LQ9NYM9 111 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 PRR13Q9NZ81 148 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 GSKIPQ9P0R6 139 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 CDC42EP3Q9UKI2 254 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 PRNDQ9UKY0 176 aa7.42□□□□□ -1.22
ACTN1-218ENST00000556343 MYO9AB2RTY4 2548 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 NCBP2LA6PVI3 153 aaKnown RBP7.41□□□□□ -1.22
ACTN1-218ENST00000556343 ADAP1O75689 374 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 IGKV1-16P04430 117 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 SNRNP70P08621 437 aaKnown RBP7.41□□□□□ -1.22
ACTN1-218ENST00000556343 PET100P0DJ07 73 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 MAS1LP35410 378 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 BRWD1-AS2P59051 145 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 HNF4GQ14541 408 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 MMDQ15546 238 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 LDLRAD2Q5SZI1 272 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 SSX9Q7RTT3 188 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 C16orf82Q7Z2V1 217 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 MRPL41Q8IXM3 137 aaKnown RBP7.41□□□□□ -1.22
ACTN1-218ENST00000556343 DYNAPQ8N1N2 210 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 NPBQ8NG41 125 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 LHFPL5Q8TAF8 219 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 EAF1Q96JC9 268 aaPredicted RBP7.41□□□□□ -1.22
ACTN1-218ENST00000556343 CHIAQ9BZP6 476 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 ENY2Q9NPA8 101 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 TMEM140Q9NV12 185 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 COA4Q9NYJ1 87 aa7.41□□□□□ -1.22
ACTN1-218ENST00000556343 CSPG4Q6UVK1 2322 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 FAM90A26D6RGX4 464 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 M0QZK8 103 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 UPK2O00526 184 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 CCSO14618 274 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 RRHO14718 337 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 NBR2O15453 112 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 LY6G6DO95868 133 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 IGKV1-39P01597 117 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 IGKV1-5P01602 117 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 IGKV1D-39P04432 117 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 FGF2P09038 288 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 PVALBP20472 110 aaPredicted RBP7.4□□□□□ -1.22
ACTN1-218ENST00000556343 NKX2-1P43699 371 aaPredicted RBP7.4□□□□□ -1.22
ACTN1-218ENST00000556343 CD83Q01151 205 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 SRSF4Q08170 494 aaKnown RBP7.4□□□□□ -1.22
ACTN1-218ENST00000556343 DEFB112Q30KQ8 113 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 NMSQ5H8A3 153 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 OR4A47Q6IF82 309 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 MMD2Q8IY49 270 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 ZBTB8BQ8NAP8 495 aaPredicted RBP7.4□□□□□ -1.22
ACTN1-218ENST00000556343 OR11H7Q8NGC8 314 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 C17orf50Q8WW18 174 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 AJUBAQ96IF1 538 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 RASL11BQ9BPW5 248 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 COMMD5Q9GZQ3 224 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 METTL1Q9UBP6 276 aaKnown RBP7.4□□□□□ -1.22
ACTN1-218ENST00000556343 CACNG5Q9UF02 275 aa7.4□□□□□ -1.22
ACTN1-218ENST00000556343 SRRM4A7MD48 611 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms