RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 ZFP57Q9NU63 452 aa4.92□□□□□ -1.62
TMEM260-209ENST00000556079 TAS2R8Q9NYW2 309 aa4.92□□□□□ -1.62
TMEM260-209ENST00000556079 FOXA2Q9Y261 457 aaPredicted RBP4.92□□□□□ -1.62
TMEM260-209ENST00000556079 RBM7Q9Y580 266 aaKnown RBP4.92□□□□□ -1.62
TMEM260-209ENST00000556079 S4R3C0 116 aa4.92□□□□□ -1.62
TMEM260-209ENST00000556079 A0A087WXM4 84 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 TRAV3A0A0B4J244 114 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 HMX3A6NHT5 357 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 TRIM64CA6NLI5 447 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 E7EUB6 86 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 SHOXO15266 292 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 EIF4EBP3O60516 100 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-209ENST00000556079 RAMP3O60896 148 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 CNIH1O95406 144 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 IGHV3-23P01764 117 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 HLA-DQB1P01920 261 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 PMP2P02689 132 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 TRGV3P03979 118 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 DTYMKP23919 212 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 FCGR2CP31995 323 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 MC5RP33032 325 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 ECI1P42126 302 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 CRIP2P52943 208 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-209ENST00000556079 TPPP2P59282 170 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 TAS2R20P59543 309 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 ZNF45Q02386 682 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 TNXAQ16473 311 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 TMEM177Q53S58 311 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 ACTBL2Q562R1 376 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 ZNF660Q6AZW8 331 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-209ENST00000556079 TMEM65Q6PI78 240 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 Q6ZS49 121 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 SSX9Q7RTT3 188 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 HOGA1Q86XE5 327 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 COMMD1Q8N668 190 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-209ENST00000556079 BEST4Q8NFU0 473 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 SECTM1Q8WVN6 248 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 FLYWCH2Q96CP2 140 aaKnown RBP4.91□□□□□ -1.62
TMEM260-209ENST00000556079 WWC2-AS2Q96NR7 200 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 TSNAXQ99598 290 aaKnown RBP4.91□□□□□ -1.62
TMEM260-209ENST00000556079 ASCL2Q99929 193 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 FXYD6Q9H0Q3 95 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 ZNF430Q9H8G1 570 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-209ENST00000556079 ZNF355PQ9NSJ1 428 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 ANXA10Q9UJ72 324 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 MGAT4AQ9UM21 535 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 VSIG4Q9Y279 399 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 RBMX2Q9Y388 322 aaKnown RBP4.91□□□□□ -1.62
TMEM260-209ENST00000556079 OR2W1Q9Y3N9 320 aa4.91□□□□□ -1.62
TMEM260-209ENST00000556079 MSGN1A6NI15 193 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 CGB1A6NKQ9 187 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 SULT1C2O00338 296 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 PAX4O43316 350 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 HPGDSO60760 199 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 RBBP9O75884 186 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 TNFAIP8O95379 198 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 REG1AP05451 166 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 LGALS1P09382 135 aaKnown RBP4.9□□□□□ -1.63
TMEM260-209ENST00000556079 AREGP15514 252 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 ELK1P19419 428 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 RFX2P48378 723 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 ARPC4P59998 168 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 CD69Q07108 199 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 ZNF616Q08AN1 781 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 DYRK1AQ13627 763 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 PRSS8Q16651 343 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 GPR107Q5VW38 600 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 CNIH2Q6PI25 160 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 ZNF562Q6V9R5 426 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 ZNF818PQ6ZRF7 136 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 KCTD9Q7L273 389 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 TMEM17Q86X19 198 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 SNX29P2Q8IUI4 249 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 ZNF645Q8N7E2 425 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 OR5M8Q8NGP6 311 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 OR13F1Q8NGS4 319 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 TCTEX1D2Q8WW35 142 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 ACOT12Q8WYK0 555 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 UBE2E2Q96LR5 201 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 COA4Q9NYJ1 87 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 COMMD3Q9UBI1 195 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 ZNF580Q9UK33 172 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 ETV7Q9Y603 341 aa4.9□□□□□ -1.63
TMEM260-209ENST00000556079 TEX22C9J3V5 150 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 LINC01619G3V211 115 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 M0QYG6 137 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 SAP30O75446 220 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 S1PR2O95136 353 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 SPDEFO95238 335 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 LY86O95711 162 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 PPYP01298 95 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 HLA-AP01891 365 aaKnown RBP4.89□□□□□ -1.63
TMEM260-209ENST00000556079 IL6RP08887 468 aaPredicted RBP4.89□□□□□ -1.63
TMEM260-209ENST00000556079 OR5H8P0DN80 308 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 SPNP16150 400 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 HLA-DMAP28067 261 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 UBE2KP61086 200 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 DGCR2P98153 550 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 RUNX1Q01196 453 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms