RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 G3V3Y1 287 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 IGHEP01854 428 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 HLA-DQA1P01909 254 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 C3orf79P0CE67 100 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 AREGP15514 252 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 PMCHP20382 165 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 HNF1AP20823 631 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 TNFSF4P23510 183 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 VEGFBP49765 207 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 ZNF83P51522 516 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 HLA-BQ31612 363 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 FBLN7Q53RD9 439 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 STUMQ69YW2 141 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 TMEM136Q6ZRR5 245 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 LYG1Q8N1E2 194 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 ST6GALNAC3Q8NDV1 305 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 BORCS7Q96B45 105 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 WDR54Q9H977 334 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 PRDM6Q9NQX0 595 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 MRPL27Q9P0M9 148 aaKnown RBP6.5□□□□□ -1.37
CHD8-209ENST00000555935 TNRC6AQ8NDV7 1962 aaKnown RBP6.5□□□□□ -1.37
CHD8-209ENST00000555935 XIRP2A4UGR9 3374 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 LOC105371242A0A075B767 164 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 TRAV30A0A087WSZ9 112 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 RBMXL2O75526 392 aaKnown RBP6.5□□□□□ -1.37
CHD8-209ENST00000555935 NEURL1O76050 574 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 OR2H2O95918 312 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 GCHFRP30047 84 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 TMPRSS3P57727 454 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 ARF1P84077 181 aaKnown RBP6.5□□□□□ -1.37
CHD8-209ENST00000555935 AARDQ4LEZ3 155 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 NIT1Q86X76 327 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 OR8I2Q8N0Y5 310 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 OR4C5Q8NGB2 326 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 OR10D3Q8NH80 312 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 OR2D2Q9H210 308 aa6.5□□□□□ -1.37
CHD8-209ENST00000555935 YTHDF2Q9Y5A9 579 aaKnown RBP6.5□□□□□ -1.37
CHD8-209ENST00000555935 IGHV1-45A0A0A0MS14 117 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 SIRPB1O00241 398 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 AMY1AP04745 511 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 CELA2AP08217 269 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 MYF5P13349 255 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 HINT1P49773 126 aaPredicted RBP6.49□□□□□ -1.37
CHD8-209ENST00000555935 RPS16P62249 146 aaKnown RBP6.49□□□□□ -1.37
CHD8-209ENST00000555935 RPL30P62888 115 aaKnown RBP6.49□□□□□ -1.37
CHD8-209ENST00000555935 IGFBP7Q16270 282 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 SPATA46Q5T0L3 261 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 UNQ5815/PRO19632Q6UWF5 114 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 TREML4Q6UXN2 200 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 YRDCQ86U90 279 aaKnown RBP6.49□□□□□ -1.37
CHD8-209ENST00000555935 OR4P4Q8NGL7 312 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 POM121L2Q96KW2 1035 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 IMMP1LQ96LU5 166 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 GGTLC1Q9BX51 225 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 OSTCQ9NRP0 149 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 POLDIP2Q9Y2S7 368 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 FAM90A9PA6NNJ1 464 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 CA2P00918 260 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 CEACAM8P31997 349 aaPredicted RBP6.49□□□□□ -1.37
CHD8-209ENST00000555935 CLDN18P56856 261 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 SMIM15Q7Z3B0 74 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 SLC25A45Q8N413 288 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 GALMQ96C23 342 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 RCHY1Q96PM5 261 aa6.49□□□□□ -1.37
CHD8-209ENST00000555935 KIAA1549Q9HCM3 1950 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 TRAV9-2A0A087WT02 112 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 TRAV34A0A0B4J273 112 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 IGLC7A0M8Q6 106 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 C17orf98A8MV24 154 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 RRHO14718 337 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 MRPL33O75394 65 aaKnown RBP6.48□□□□□ -1.37
CHD8-209ENST00000555935 RHBDL1O75783 438 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 CCL2P13500 99 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 ARR3P36575 388 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 GFRA1P56159 465 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 UBALD1Q8TB05 177 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 C5orf30Q96GV9 206 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 HSD17B10Q99714 261 aaKnown RBP6.48□□□□□ -1.37
CHD8-209ENST00000555935 MGST2Q99735 147 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 IGKV3D-15A0A087WSY6 115 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 TMEM30CPA0ZSE6 113 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 EPOPA6NHQ4 379 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 BMPR1BO00238 502 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 NXPH2O95156 264 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 NGFP01138 241 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 FRMD6-AS1P0C7T7 363 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 COX6A1P12074 109 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 SRIP30626 198 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 GNG4P50150 75 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 BRWD1-AS2P59051 145 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 SELENOVP59797 346 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 ERVK11-1P61568 191 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 ZNF146Q15072 292 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 SLC23A3Q6PIS1 610 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 VASH2Q86V25 355 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 MUC15Q8N387 334 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 ZNF808Q8N4W9 903 aaPredicted RBP6.48□□□□□ -1.37
CHD8-209ENST00000555935 ZNF439Q8NDP4 499 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 ABHD3Q8WU67 409 aa6.48□□□□□ -1.37
CHD8-209ENST00000555935 TSKUQ8WUA8 353 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms