RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 OR5T1Q8NG75 326 aa7.13□□□□□ -1.27
VIPAS39-207ENST00000555854 OR13F1Q8NGS4 319 aa7.13□□□□□ -1.27
VIPAS39-207ENST00000555854 FCGR1BQ92637 280 aa7.13□□□□□ -1.27
VIPAS39-207ENST00000555854 GINS4Q9BRT9 223 aa7.13□□□□□ -1.27
VIPAS39-207ENST00000555854 SLA2Q9H6Q3 261 aa7.13□□□□□ -1.27
VIPAS39-207ENST00000555854 RHBDL2Q9NX52 303 aa7.13□□□□□ -1.27
VIPAS39-207ENST00000555854 DAPK2Q9UIK4 370 aa7.13□□□□□ -1.27
VIPAS39-207ENST00000555854 A0A1B0GW64 132 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 METTL21EPA6NDL7 271 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 H3BUA1 57 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 J3QRK9 145 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 SHOXO15266 292 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 TUSC2O75896 110 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 BRI3O95415 125 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 CRYZL1O95825 349 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 HLA-DQB1P01920 261 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 HSPB1P04792 205 aaKnown RBP7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 PTHLHP12272 177 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 LGALS7P47929 136 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 UBE2KP61086 200 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 ZNF45Q02386 682 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 PRSS8Q16651 343 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 IL34Q6ZMJ4 242 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 OVCH2Q7RTZ1 564 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 CLVS1Q8IUQ0 354 aaPredicted RBP7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 ZNF645Q8N7E2 425 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 ADAD2Q8NCV1 583 aaKnown RBP7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 ISOC1Q96CN7 298 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 WWC2-AS2Q96NR7 200 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 CENPOQ9BU64 300 aa7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 TINAGL1Q9GZM7 467 aaPredicted RBP7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 ZMAT5Q9UDW3 170 aaKnown RBP7.12□□□□□ -1.27
VIPAS39-207ENST00000555854 LY86O95711 162 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 IGLV1-51P01701 117 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 GP9P14770 177 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 TALDO1P37837 337 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 RANBP1P43487 201 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 PITPNAQ00169 270 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 TAGLNQ01995 201 aaKnown RBP7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 MXD1Q05195 221 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 NEDD8Q15843 81 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 RTL8BQ17RB0 113 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 OR2B11Q5JQS5 317 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 TPRA1Q86W33 373 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 ANKRD13BQ86YJ7 626 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 SBSPONQ8IVN8 264 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 GVQW1Q8N7I0 195 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 SRSF12Q8WXF0 261 aaKnown RBP7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 GPHA2Q96T91 129 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 ST6GALNAC5Q9BVH7 336 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 DCSTAMPQ9H295 470 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 ZNF430Q9H8G1 570 aaPredicted RBP7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 ANXA10Q9UJ72 324 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 SSR3Q9UNL2 185 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 RBMX2Q9Y388 322 aaKnown RBP7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 OR2W1Q9Y3N9 320 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 U3KQK5 164 aa7.11□□□□□ -1.27
VIPAS39-207ENST00000555854 LOC100506127A0A0U1RQW1 187 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 ANKRD34BA5PLL1 514 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 TEX22C9J3V5 150 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 E7EUB6 86 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 FCGR3BO75015 233 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 CNIH1O95406 144 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 PRH1P02810 166 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 FRMD6-AS1P0C7T7 363 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 NHLRC4P0CG21 123 aaPredicted RBP7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 RRASP10301 218 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 GNG2P59768 71 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 KLF5Q13887 457 aaPredicted RBP7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 ARL6IP1Q15041 203 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 TNXAQ16473 311 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 ZNF343Q6P1L6 599 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 CNIH2Q6PI25 160 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 KCTD9Q7L273 389 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 VKORC1L1Q8N0U8 176 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 Q8N1Y9 231 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 TEX45Q8NA69 505 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 OSR1Q8TAX0 266 aaPredicted RBP7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 S100ZQ8WXG8 99 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 SNAPC3Q92966 411 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 BORCS5Q969J3 196 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 ADTRPQ96IZ2 230 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 THAP7Q9BT49 309 aaPredicted RBP7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 RBM7Q9Y580 266 aaKnown RBP7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 SMAD5-AS1Q9Y6J3 95 aa7.1□□□□□ -1.27
VIPAS39-207ENST00000555854 TRBV9A0A0B4J1U6 114 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 MSGN1A6NI15 193 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 CGB1A6NKQ9 187 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 MYOD1P15172 320 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 CD36P16671 472 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 EDN2P20800 178 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 AADACP22760 399 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 SYNJ2BPP57105 145 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 CDK10Q15131 360 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 VMA21Q3ZAQ7 101 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 PUSL1Q8N0Z8 303 aaKnown RBP7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 OR6Q1Q8NGQ2 317 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 ACOT12Q8WYK0 555 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 TMEM68Q96MH6 324 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 AKIP1Q9NQ31 210 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms