RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PTNP21246 168 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 OR10A3P58181 314 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 TMEM267Q0VDI3 215 aaPredicted RBP-0.13□□□□□ -2.43
SNX6-204ENST00000555541 RAB31Q13636 194 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 NDUFA5Q16718 116 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 DHFR2Q86XF0 187 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 C10orf67Q8IYJ2 551 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 ZNF676Q8N7Q3 588 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 Q8N814 137 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 OR5B17Q8NGF7 314 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 SGMS2Q8NHU3 365 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 Q8WTZ3 238 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 CCDC12Q8WUD4 166 aaPredicted RBP-0.13□□□□□ -2.43
SNX6-204ENST00000555541 CPNE2Q96FN4 548 aaPredicted RBP-0.13□□□□□ -2.43
SNX6-204ENST00000555541 TMEM208Q9BTX3 173 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 KRTAP2-4Q9BYR9 128 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 KRTAP2-1Q9BYU5 128 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 YIPF3Q9GZM5 350 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 ZNHIT6Q9NWK9 470 aaKnown RBP-0.13□□□□□ -2.43
SNX6-204ENST00000555541 PLAC8Q9NZF1 115 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 MAT2BQ9NZL9 334 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 NXT1Q9UKK6 140 aaKnown RBP-0.13□□□□□ -2.43
SNX6-204ENST00000555541 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.13□□□□□ -2.43
SNX6-204ENST00000555541 LHFPL6Q9Y693 200 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 BZW2Q9Y6E2 419 aaKnown RBP-0.13□□□□□ -2.43
SNX6-204ENST00000555541 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.13□□□□□ -2.43
SNX6-204ENST00000555541 NUP160Q12769 1436 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 KIF24Q5T7B8 1368 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 A0A1B0GX12 115 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 IRGMA1A4Y4 181 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 OR6C6A6NF89 314 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 TRAPPC2LH3BP13 241 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 M0R381 172 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 LIN7AO14910 233 aaPredicted RBP-0.14□□□□□ -2.43
SNX6-204ENST00000555541 NCR3O14931 201 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 SHBGP04278 402 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 HLA-DQB2P05538 268 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 NQO2P16083 231 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 F8A1P23610 371 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 SLCO1A2P46721 670 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 HAAOP46952 286 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 UBE2IP63279 158 aaKnown RBP-0.14□□□□□ -2.43
SNX6-204ENST00000555541 CIRBPQ14011 172 aaKnown RBP-0.14□□□□□ -2.43
SNX6-204ENST00000555541 ZNF345Q14585 488 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 ACSM3Q53FZ2 586 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 GDF5OSQ5U4N7 250 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 LCN8Q6JVE9 175 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 RASSF6Q6ZTQ3 369 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 C17orf78Q8N4C9 275 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 LINC00471Q8N535 108 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 CDRT4Q8N9R6 151 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 DYNC2LI1Q8TCX1 351 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 RAB2BQ8WUD1 216 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 TLCD1Q96CP7 247 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 MS4A6EQ96DS6 147 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 TMEM56Q96MV1 263 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 UGT2B28Q9BY64 529 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 NCOR1P1Q9H4R4 102 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 UBQLN4Q9NRR5 601 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 CISHQ9NSE2 258 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 SMARCA4P51532 1647 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 CNTRLQ7Z7A1 2325 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 NPATQ14207 1427 aa-0.14□□□□□ -2.43
SNX6-204ENST00000555541 C9JCJ5 164 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 C19orf84I3L1E1 186 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 K7ERQ8 282 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 SULT1C2O00338 296 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 UGT2B11O75310 529 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 LDOC1O95751 146 aaPredicted RBP-0.15□□□□□ -2.43
SNX6-204ENST00000555541 MSMBP08118 114 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 LIMS3P0CW19 117 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 LIMS4P0CW20 117 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 CFL1P23528 166 aaKnown RBP-0.15□□□□□ -2.43
SNX6-204ENST00000555541 BRS3P32247 399 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 SPINK7P58062 85 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 RPL30P62888 115 aaKnown RBP-0.15□□□□□ -2.43
SNX6-204ENST00000555541 GNA13Q14344 377 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 EXOC3L4Q17RC7 722 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 SMIM12Q96EX1 92 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 FAM210AQ96ND0 272 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 ERMAPQ96PL5 475 aaPredicted RBP-0.15□□□□□ -2.43
SNX6-204ENST00000555541 MED10Q9BTT4 135 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 TMEM109Q9BVC6 243 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 PRRG3Q9BZD7 231 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 RAB1BQ9H0U4 201 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 BAIAP2Q9UQB8 552 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 RBMX2Q9Y388 322 aaKnown RBP-0.15□□□□□ -2.43
SNX6-204ENST00000555541 HDGFL3Q9Y3E1 203 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 TIMM22Q9Y584 194 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 KCPQ6ZWJ8 1503 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 GREB1Q4ZG55 1949 aa-0.15□□□□□ -2.43
SNX6-204ENST00000555541 DICER1Q9UPY3 1922 aaKnown RBP-0.16□□□□□ -2.43
SNX6-204ENST00000555541 TRBV10-2A0A0K0K1G8 114 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 FUOMA2VDF0 154 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 F5H5K5 113 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 SLC22A1O15245 554 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 HYPMO75409 117 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 METTL15P1P0C7V9 234 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 PVALBP20472 110 aaPredicted RBP-0.16□□□□□ -2.44
SNX6-204ENST00000555541 EIF2B2P49770 351 aaKnown RBP-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms