RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 CCSO14618 274 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 SNRNP70P08621 437 aaKnown RBP8.75□□□□□ -1.01
SHMT2-218ENST00000555213 TMEM11P17152 192 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 UCP1P25874 307 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 RAB13P51153 203 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 SRSF2Q01130 221 aaKnown RBP8.75□□□□□ -1.01
SHMT2-218ENST00000555213 DIAPH2-AS1Q14236 149 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 RPL39P5Q59GN2 51 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 LYZL2Q7Z4W2 148 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 THNSL2Q86YJ6 484 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 CCDC71LQ8N9Z2 235 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 OR4C13Q8NGP0 309 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 OR10C1Q96KK4 312 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 PHB2Q99623 299 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 KCNIP3Q9Y2W7 256 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 ANK3Q12955 4377 aaKnown RBP8.74□□□□□ -1.01
SHMT2-218ENST00000555213 ATRQ13535 2644 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 A6NDX4 124 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 M0QZK8 103 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 M0R1X1 148 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 GOSR2O14653 212 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 OR2F2O95006 317 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 MOSP00540 346 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 IGKV1D-33P01593 117 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 IGKV1-33P01594 117 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 APOA2P02652 100 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 CD1BP29016 333 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 MC5RP33032 325 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 DUTP33316 252 aaKnown RBP8.74□□□□□ -1.01
SHMT2-218ENST00000555213 HABP2Q14520 560 aaPredicted RBP8.74□□□□□ -1.01
SHMT2-218ENST00000555213 TMEM219Q86XT9 240 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 CMTM1Q8IZ96 169 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.74□□□□□ -1.01
SHMT2-218ENST00000555213 OR11H4Q8NGC9 324 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 OR5M8Q8NGP6 311 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 OR2T10Q8NGZ9 312 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 PIFOQ8TCI5 191 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 DDB2Q92466 427 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 CFHR4Q92496 578 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 RBMXL1Q96E39 390 aaKnown RBP8.74□□□□□ -1.01
SHMT2-218ENST00000555213 SEC22AQ96IW7 307 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 ADTRPQ96IZ2 230 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 SLC25A33Q9BSK2 321 aa8.74□□□□□ -1.01
SHMT2-218ENST00000555213 IGHV3-72A0A0B4J1Y9 119 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 H0Y980 276 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 H7C2Y5 167 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 HOXB5P09067 269 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 GIPP09681 153 aaPredicted RBP8.73□□□□□ -1.01
SHMT2-218ENST00000555213 CD24P25063 80 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 THBS3P49746 956 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 TAGLNQ01995 201 aaKnown RBP8.73□□□□□ -1.01
SHMT2-218ENST00000555213 RTL8BQ17RB0 113 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 KRTAP24-1Q3LI83 254 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 GGNBP1Q5YKI7 109 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 OR8H1Q8NGG4 311 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 OR4F5Q8NH21 305 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 COQ8AQ8NI60 647 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 NABP2Q9BQ15 211 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 C19orf24Q9BVV8 132 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 RANBP3Q9H6Z4 567 aaPredicted RBP8.73□□□□□ -1.01
SHMT2-218ENST00000555213 MOB4Q9Y3A3 225 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 WASHC3Q9Y3C0 194 aa8.73□□□□□ -1.01
SHMT2-218ENST00000555213 SVEP1Q4LDE5 3571 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 TRAV14DV4A0A0A6YYC5 116 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 A0A0G2JRQ6 117 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 FAM90A9PA6NNJ1 464 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 CHST1O43916 411 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 RAMP3O60896 148 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 NDUFA7O95182 113 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 C1QBP02746 253 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 CT45A6P0DMU7 189 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 CT45A5P0DMU8 189 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 CT45A7P0DMV0 189 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 ANXA3P12429 323 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 S100GP29377 79 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 ARSJQ5FYB0 599 aaPredicted RBP8.72□□□□□ -1.01
SHMT2-218ENST00000555213 LAMTOR1Q6IAA8 161 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 ZNF66Q6ZN08 573 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 Q6ZRM9 215 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 LGI3Q8N145 548 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 ZNF383Q8NA42 475 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 DRAXINQ8NBI3 349 aaPredicted RBP8.72□□□□□ -1.01
SHMT2-218ENST00000555213 OR51H1Q8NH63 302 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 EAF1Q96JC9 268 aaPredicted RBP8.72□□□□□ -1.01
SHMT2-218ENST00000555213 RBM14Q96PK6 669 aaKnown RBP8.72□□□□□ -1.01
SHMT2-218ENST00000555213 HSD17B10Q99714 261 aaKnown RBP8.72□□□□□ -1.01
SHMT2-218ENST00000555213 RNF126Q9BV68 326 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 C1RLQ9NZP8 487 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 PRELID3BQ9Y3B1 194 aa8.72□□□□□ -1.01
SHMT2-218ENST00000555213 A0A1B0GUS0 222 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 H0YJW9 148 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 B3GALNT1O75752 331 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 IGKV1-5P01602 117 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 HNRNPCP07910 306 aaKnown RBP eCLIP8.71□□□□□ -1.02
SHMT2-218ENST00000555213 P0C879 139 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 HKR1P10072 659 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 RRASP10301 218 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 LPAR6P43657 344 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 NKX2-5P52952 324 aaPredicted RBP8.71□□□□□ -1.02
SHMT2-218ENST00000555213 RAP2BP61225 183 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms