RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 A0A0U1RQK1 487 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 A0A1B0GU03 582 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 C13orf42A0A1B0GVH6 325 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 CCSO14618 274 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 PFDN1O60925 122 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 CCNKO75909 580 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 SPDEFO95238 335 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 IGKV1-16P04430 117 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 GIPP09681 153 aaPredicted RBP11.56□□□□□ -0.56
SHOX2-206ENST00000554685 CD99P14209 185 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 G6PCP35575 357 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 RAP2BP61225 183 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 IAH1Q2TAA2 248 aaPredicted RBP11.56□□□□□ -0.56
SHOX2-206ENST00000554685 NMSQ5H8A3 153 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 DYNAPQ8N1N2 210 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 C17orf50Q8WW18 174 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 C2orf50Q96LR7 162 aa11.56□□□□□ -0.56
SHOX2-206ENST00000554685 ZNF436Q9C0F3 470 aaPredicted RBP11.56□□□□□ -0.56
SHOX2-206ENST00000554685 ITPR3Q14573 2671 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 IGKV1D-33P01593 117 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 IGKV1-33P01594 117 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 IGKV1-5P01602 117 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 SNRNP70P08621 437 aaKnown RBP11.55□□□□□ -0.56
SHOX2-206ENST00000554685 CXCL3P19876 107 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 SRP14P37108 136 aaKnown RBP11.55□□□□□ -0.56
SHOX2-206ENST00000554685 EBI3Q14213 229 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 HES1Q14469 280 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 SMCO1Q147U7 214 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 C2orf68Q2NKX9 166 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 LRRC75BQ2VPJ9 315 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 FAM120AOSQ5T036 256 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 OR8H1Q8NGG4 311 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 OR4A5Q8NH83 315 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 NMES1Q9C002 83 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 RANBP3Q9H6Z4 567 aaPredicted RBP11.55□□□□□ -0.56
SHOX2-206ENST00000554685 ZFP57Q9NU63 452 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 COA4Q9NYJ1 87 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 BET1LQ9NYM9 111 aa11.55□□□□□ -0.56
SHOX2-206ENST00000554685 SNAPC5O75971 98 aa11.54□□□□□ -0.56
SHOX2-206ENST00000554685 OR2A4O95047 310 aa11.54□□□□□ -0.56
SHOX2-206ENST00000554685 P0C879 139 aa11.54□□□□□ -0.56
SHOX2-206ENST00000554685 H2BFSP57053 126 aa11.54□□□□□ -0.56
SHOX2-206ENST00000554685 UBE2KP61086 200 aa11.54□□□□□ -0.56
SHOX2-206ENST00000554685 CD83Q01151 205 aa11.54□□□□□ -0.56
SHOX2-206ENST00000554685 SRSF4Q08170 494 aaKnown RBP11.54□□□□□ -0.56
SHOX2-206ENST00000554685 TEX45Q8NA69 505 aa11.54□□□□□ -0.56
SHOX2-206ENST00000554685 ZBTB8BQ8NAP8 495 aaPredicted RBP11.54□□□□□ -0.56
SHOX2-206ENST00000554685 GPR146Q96CH1 333 aa11.54□□□□□ -0.56
SHOX2-206ENST00000554685 EAF1Q96JC9 268 aaPredicted RBP11.54□□□□□ -0.56
SHOX2-206ENST00000554685 OR2A7Q96R45 310 aa11.54□□□□□ -0.56
SHOX2-206ENST00000554685 TMEM140Q9NV12 185 aa11.54□□□□□ -0.56
SHOX2-206ENST00000554685 C1RLQ9NZP8 487 aa11.54□□□□□ -0.56
SHOX2-206ENST00000554685 KIAA1456Q9P272 454 aa11.54□□□□□ -0.56
SHOX2-206ENST00000554685 MAP1AP78559 2803 aaPredicted RBP11.54□□□□□ -0.56
SHOX2-206ENST00000554685 NOTCH2Q04721 2471 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 SIX6O95475 246 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 FGF2P09038 288 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 SAA1P0DJI8 122 aaPredicted RBP11.53□□□□□ -0.56
SHOX2-206ENST00000554685 TMEM11P17152 192 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 FGL1Q08830 312 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 OR4A47Q6IF82 309 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 SSX9Q7RTT3 188 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 OR4A16Q8NH70 328 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 OR1S1Q8NH92 325 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 OR10C1Q96KK4 312 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 CHIAQ9BZP6 476 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.53□□□□□ -0.56
SHOX2-206ENST00000554685 GSKIPQ9P0R6 139 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 CACNG5Q9UF02 275 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 PITPNC1Q9UKF7 332 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 AKAP9Q99996 3911 aa11.53□□□□□ -0.56
SHOX2-206ENST00000554685 VPS13CQ709C8 3753 aa11.52□□□□□ -0.56
SHOX2-206ENST00000554685 A0A0G2JRQ6 117 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 BTBD17A6NE02 478 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 FAM90A26D6RGX4 464 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 NBR2O15453 112 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 RBMXL2O75526 392 aaKnown RBP11.52□□□□□ -0.57
SHOX2-206ENST00000554685 KBTBD11O94819 623 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 PET100P0DJ07 73 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 MMDQ15546 238 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 FOXRED2Q8IWF2 684 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 TCTE3Q8IZS6 198 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 PUSL1Q8N0Z8 303 aaKnown RBP11.52□□□□□ -0.57
SHOX2-206ENST00000554685 NPBQ8NG41 125 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 OR5R1Q8NH85 324 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 TMEM167AQ8TBQ9 72 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 SSX3Q99909 188 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 FKBP11Q9NYL4 201 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 PRNDQ9UKY0 176 aa11.52□□□□□ -0.57
SHOX2-206ENST00000554685 SRRM4A7MD48 611 aaKnown RBP11.51□□□□□ -0.57
SHOX2-206ENST00000554685 MPTX1A8MV57 137 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 UPK2O00526 184 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 RRHO14718 337 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 SLC25A17O43808 307 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 NDUFA3O95167 84 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 LY6G6DO95868 133 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 IGLV2-23P01705 113 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 PAX6P26367 422 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 PLGLAQ15195 96 aa11.51□□□□□ -0.57
SHOX2-206ENST00000554685 PSG5Q15238 335 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms