RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 TEX45Q8NA69 505 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 VSTM2AQ8TAG5 236 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 ABHD5Q8WTS1 349 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 CHPT1Q8WUD6 406 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 CLCC1Q96S66 551 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 HSPB9Q9BQS6 159 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 GON7Q9BXV9 100 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 WDR12Q9GZL7 423 aaKnown RBP10.96□□□□□ -0.65
TUBB3-202ENST00000553656 PARP11Q9NR21 331 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 LINC00854A0A1B0GVQ3 168 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 RAMP3O60896 148 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 ACTL6BO94805 426 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 HPRT1P00492 218 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 IGLV2-23P01705 113 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 CTSDP07339 412 aaPredicted RBP10.95□□□□□ -0.66
TUBB3-202ENST00000553656 IL7P13232 177 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 VDAC1P21796 283 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 ERVK-16P61578 105 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 RND3P61587 244 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 GNB1P62873 340 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 SLC35B1P78383 322 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 CCDC32Q9BV29 185 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 OR51J1Q9H342 316 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 PLEKHA2Q9HB19 425 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 COMMD9Q9P000 198 aa10.95□□□□□ -0.66
TUBB3-202ENST00000553656 IGHV7-81A0A0B4J1V7 117 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 PSMB11A5LHX3 300 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 NAP1L6A6NFF2 107 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 SRRM4A7MD48 611 aaKnown RBP10.94□□□□□ -0.66
TUBB3-202ENST00000553656 MPPED1O15442 326 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 CNIH1O95406 144 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 CA2P00918 260 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 SERPINE2P07093 398 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 SAA1P0DJI8 122 aaPredicted RBP10.94□□□□□ -0.66
TUBB3-202ENST00000553656 NQO2P16083 231 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 TAS2R31P59538 309 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 CX3CL1P78423 397 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 ZNF846Q147U1 533 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 STPG2Q8N412 459 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 DMBX1Q8NFW5 382 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 OR4X2Q8NGF9 303 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 RHOVQ96L33 236 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 NOL4LQ96MY1 436 aaPredicted RBP10.94□□□□□ -0.66
TUBB3-202ENST00000553656 SDHCQ99643 169 aaPredicted RBP10.94□□□□□ -0.66
TUBB3-202ENST00000553656 WNT10AQ9GZT5 417 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 TPSG1Q9NRR2 321 aa10.94□□□□□ -0.66
TUBB3-202ENST00000553656 TEX13DA0A0J9YY54 714 aaPredicted RBP10.93□□□□□ -0.66
TUBB3-202ENST00000553656 ATP6V0E1O15342 81 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 FBXO24O75426 580 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 OR2A4O95047 310 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 S1PR2O95136 353 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 CD40LGP29965 261 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 LPAR6P43657 344 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 BRWD1-AS2P59051 145 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 ZNF562Q6V9R5 426 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 SSX9Q7RTT3 188 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 VKORC1L1Q8N0U8 176 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 OR5AU1Q8NGC0 362 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 ARPC1AQ92747 370 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 MRGPRFQ96AM1 343 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 OR2A7Q96R45 310 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 C7orf50Q9BRJ6 194 aaKnown RBP10.93□□□□□ -0.66
TUBB3-202ENST00000553656 FAM212BQ9NTI7 297 aaPredicted RBP10.93□□□□□ -0.66
TUBB3-202ENST00000553656 LINC00527Q9UJ94 153 aa10.93□□□□□ -0.66
TUBB3-202ENST00000553656 C3orf85A0A1B0GTC6 90 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 LINC01548A6NM66 108 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 H0Y980 276 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 FCN1O00602 326 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 B3GALNT1O75752 331 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 IGF1P05019 195 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 CRYGBP07316 175 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 TMEM267Q0VDI3 215 aaPredicted RBP10.92□□□□□ -0.66
TUBB3-202ENST00000553656 FXYD3Q14802 87 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 PRSS8Q16651 343 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 MMD2Q8IY49 270 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 C11orf44Q8N8P7 122 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 OR4A5Q8NH83 315 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 GRPEL2Q8TAA5 225 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 R3HDM4Q96D70 268 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 SLC25A21Q9BQT8 299 aaPredicted RBP10.92□□□□□ -0.66
TUBB3-202ENST00000553656 C5orf66Q9H5L9 145 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 ZNF580Q9UK33 172 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 GPR132Q9UNW8 380 aa10.92□□□□□ -0.66
TUBB3-202ENST00000553656 TRAV41A0A0B4J266 112 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 ATG12O94817 140 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 KBTBD11O94819 623 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 RPA2P15927 270 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 SRSF4Q08170 494 aaKnown RBP10.91□□□□□ -0.66
TUBB3-202ENST00000553656 PJVKQ0ZLH3 352 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 RBMS2Q15434 407 aaKnown RBP10.91□□□□□ -0.66
TUBB3-202ENST00000553656 TNXAQ16473 311 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 ECSCRQ19T08 205 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 TRIM16LQ309B1 348 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 OR4A47Q6IF82 309 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 TMED4Q7Z7H5 227 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 ZNF329Q86UD4 541 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 SGPP2Q8IWX5 399 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 COMMD1Q8N668 190 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 PHB2Q99623 299 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 CITED1Q99966 193 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms