RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 NDPQ00604 133 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 INCA1Q0VD86 236 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 RASL11AQ6T310 242 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 CLEC19AQ6UXS0 136 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 FAM71E2Q8N5Q1 922 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 KRTCAP2Q8N6L1 136 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 OR10AD1Q8NGE0 317 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 KLK6Q92876 244 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 STARD4Q96DR4 205 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 ADAT3Q96EY9 351 aaPredicted RBP2.64□□□□□ -1.99
TDP1-207ENST00000553617 GALNT14Q96FL9 552 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 RNF185Q96GF1 192 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 NRTNQ99748 197 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 ANAPC13Q9BS18 74 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 OR2J1Q9GZK6 312 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 OR8D2Q9GZM6 311 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 LINC00597Q9H2U6 94 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 Q9H521 79 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 UBQLN4Q9NRR5 601 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 PRR34Q9NV39 138 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 SCN3BQ9NY72 215 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 SLC23A2Q9UGH3 650 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 WASHC3Q9Y3C0 194 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 HSPE1-MOB4S4R3N1 261 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 EEA1Q15075 1411 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 SSH2Q76I76 1423 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 KIAA1107Q9UPP5 1409 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 TSPOAP1O95153 1857 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 CCDC18Q5T9S5 1454 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 PLXND1Q9Y4D7 1925 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 CHD2O14647 1828 aaKnown RBP2.63□□□□□ -1.99
TDP1-207ENST00000553617 RTL1A6NKG5 1358 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 PTPRKQ15262 1439 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 hCG_1818297A0A087WSY0 165 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 IGHV3OR16-9A0A0B4J2B5 98 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 C5orf63A6NC05 138 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 A8MT66 165 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 KRBOX1C9JBD0 128 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 J3QR89 54 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 K7EPK0 472 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 ZNF682O95780 498 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 IGKV3-15P01624 115 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 HLA-DRB1P01911 266 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 CRYBA1P05813 215 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 PPP1CCP36873 323 aaKnown RBP2.63□□□□□ -1.99
TDP1-207ENST00000553617 RAB5CP51148 216 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 ZNF140P52738 457 aaPredicted RBP2.63□□□□□ -1.99
TDP1-207ENST00000553617 TAS2R20P59543 309 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 COPZ1P61923 177 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 RPS23P62266 143 aaKnown RBP2.63□□□□□ -1.99
TDP1-207ENST00000553617 CDK6Q00534 326 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 FABP5Q01469 135 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 IFITM3Q01628 133 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 GNA12Q03113 381 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 TMEM267Q0VDI3 215 aaPredicted RBP2.63□□□□□ -1.99
TDP1-207ENST00000553617 PSG7Q13046 419 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 PNOCQ13519 176 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 ZNF79Q15937 498 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 ZNF181Q2M3W8 571 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 C12orf74Q32Q52 190 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 CCSMST1Q4G0I0 132 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 LCN8Q6JVE9 175 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 PRSS54Q6PEW0 395 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 TCF23Q7RTU1 214 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 DAZ4Q86SG3 579 aaKnown RBP2.63□□□□□ -1.99
TDP1-207ENST00000553617 SGPP2Q8IWX5 399 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 OR5A2Q8NGI9 324 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 CCL17Q92583 94 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 PHYHIPLQ96FC7 376 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 HSD17B10Q99714 261 aaKnown RBP2.63□□□□□ -1.99
TDP1-207ENST00000553617 PRSS27Q9BQR3 290 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 ZNF471Q9BX82 626 aaPredicted RBP2.63□□□□□ -1.99
TDP1-207ENST00000553617 DAZ1Q9NQZ3 744 aaKnown RBP2.63□□□□□ -1.99
TDP1-207ENST00000553617 KCNIP2Q9NS61 270 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 MCTS1Q9ULC4 181 aaKnown RBP2.63□□□□□ -1.99
TDP1-207ENST00000553617 MED31Q9Y3C7 131 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 INSIG2Q9Y5U4 225 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 PXMP4Q9Y6I8 212 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 V9GYS6 101 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 DYSFO75923 2080 aa2.63□□□□□ -1.99
TDP1-207ENST00000553617 ZCCHC11Q5TAX3 1644 aaKnown RBP2.63□□□□□ -1.99
TDP1-207ENST00000553617 ZNF608Q9ULD9 1512 aaPredicted RBP2.63□□□□□ -1.99
TDP1-207ENST00000553617 SCN10AQ9Y5Y9 1956 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 TMED7-TICAM2A0A0A6YYA0 188 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 TRAV5A0A0B4J249 113 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 WI2-2373I1.2A0A1W2PRP0 233 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 PGPA6NDG6 321 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 IFITM5A6NNB3 132 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 UPK2O00526 184 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 ZNF861PO60384 105 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 CXorf1O96002 111 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 CA2P00918 260 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 GYPCP04921 128 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 HLA-DQB2P05538 268 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 OR4Q2P0C623 313 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 ZNF19P17023 458 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 ELK1P19419 428 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 RPS4Y1P22090 263 aaKnown RBP2.62□□□□□ -1.99
TDP1-207ENST00000553617 CCL1P22362 96 aa2.62□□□□□ -1.99
TDP1-207ENST00000553617 CD70P32970 193 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms