RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 TFF3Q07654 80 aa7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 ATRAIDQ6UW56 229 aa7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 TMEM14EPQ6UXP3 125 aa7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 CIB3Q96Q77 187 aaPredicted RBP7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 LINC00574Q9H8X3 128 aa7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 UMAD1C9J7I0 102 aa7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 RNASEK-C17orf49H0YIS7 233 aa7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 H7C2Y5 167 aa7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 NUPL2O15504 423 aaKnown RBP7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 GNLYP22749 145 aa7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 TMEM30BQ3MIR4 351 aa7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 OR10P1Q8NGE3 313 aa7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 OR10X1Q8NGY0 326 aa7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 CLCC1Q96S66 551 aa7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 SLC35D1Q9NTN3 355 aa7.45□□□□□ -1.22
RAB3IP-218ENST00000553099 TNFRSF13BO14836 293 aaPredicted RBP7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 IFNA10P01566 189 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 IGKV1-16P04430 117 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 SFTA3P0C7M3 94 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 M6PRP20645 277 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 SNCAP37840 140 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 PPT1P50897 306 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 ELLP55199 621 aaPredicted RBP7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 PRB3Q04118 309 aaPredicted RBP7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 GUCA2BQ16661 112 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 OR4A47Q6IF82 309 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 LYPD6BQ8NI32 183 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 ADTRPQ96IZ2 230 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 HEYLQ9NQ87 328 aaPredicted RBP7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 KAAG1Q9UBP8 84 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 GAB2Q9UQC2 676 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 SPTAN1Q13813 2472 aaKnown RBP7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 CACNA1BQ00975 2339 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 NDUFA2O43678 99 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 H2AFB1P0C5Y9 115 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 CT45A6P0DMU7 189 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 CT45A5P0DMU8 189 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 CT45A7P0DMV0 189 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 HOXA1P49639 335 aaPredicted RBP7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 DVL1P1P54792 670 aaPredicted RBP7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 DLX1P56177 255 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 RELBQ01201 579 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 GUK1Q16774 197 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 RTL8BQ17RB0 113 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 RAB39BQ96DA2 213 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 HINT2Q9BX68 163 aa7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 MRPL20Q9BYC9 149 aaKnown RBP7.44□□□□□ -1.22
RAB3IP-218ENST00000553099 SOD3P08294 240 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 PPOXP50336 477 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 LRRC75BQ2VPJ9 315 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 SVBPQ8N300 66 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 OR10A7Q8NGE5 316 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 OR13D1Q8NGV5 346 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 SFT2D1Q8WV19 159 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 TMEM204Q9BSN7 226 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 WDR61Q9GZS3 305 aaKnown RBP7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 RAB1BQ9H0U4 201 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 VSIRQ9H7M9 311 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 C9JQL5 133 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 HRASP01112 189 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 OPN1MWP04001 364 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 OPN1MW2P0DN77 364 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 OPN1MW3P0DN78 364 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 SPCS3P61009 180 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 PINX1Q96BK5 328 aaKnown RBP7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 NKX6-2Q9C056 277 aaPredicted RBP7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 HIPK2Q9H2X6 1198 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 CBLN4Q9NTU7 201 aa7.43□□□□□ -1.22
RAB3IP-218ENST00000553099 WNK2Q9Y3S1 2297 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 SMCO3A2RU48 225 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 FAM90A9PA6NNJ1 464 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 C15orf61A6NNL5 157 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 J3QR06 171 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 TSPAN4O14817 238 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 PPIHO43447 177 aaKnown RBP7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 APOA2P02652 100 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 CD5P06127 495 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 OR8U8P0C7N1 319 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 MYOD1P15172 320 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 FGF7P21781 194 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 TLE4Q04727 773 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 DIAPH2-AS1Q14236 149 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 TMEM155Q4W5P6 130 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 AKIRIN2Q53H80 203 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 PUSL1Q8N0Z8 303 aaKnown RBP7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 TAF15Q92804 592 aaKnown RBP eCLIP7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 PBDC1Q9BVG4 233 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 TMEM147Q9BVK8 224 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 SEC11CQ9BY50 192 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 TCF19Q9Y242 345 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 PLXNB1O43157 2135 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 C15orf62A8K5M9 175 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 EIF3GO75821 320 aaKnown RBP eCLIP7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 IGHV2-70P01814 119 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 IGHV1-8P0DP01 117 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 CCL20P78556 96 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 PEA15Q15121 130 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 C4orf17Q53FE4 359 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 ZNF833PQ6ZTB9 187 aa7.42□□□□□ -1.22
RAB3IP-218ENST00000553099 ABHD12Q8N2K0 398 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms