RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 UNQ5815/PRO19632Q6UWF5 114 aa14.48□□□□□ -0.09
PRPF40B-216ENST00000552301 LCNL1Q6ZST4 164 aa14.48□□□□□ -0.09
PRPF40B-216ENST00000552301 ZNF695Q8IW36 515 aa14.48□□□□□ -0.09
PRPF40B-216ENST00000552301 SPAG16Q8N0X2 631 aa14.48□□□□□ -0.09
PRPF40B-216ENST00000552301 OR51H1Q8NH63 302 aa14.48□□□□□ -0.09
PRPF40B-216ENST00000552301 VSTM2AQ8TAG5 236 aa14.48□□□□□ -0.09
PRPF40B-216ENST00000552301 FXYD6Q9H0Q3 95 aa14.48□□□□□ -0.09
PRPF40B-216ENST00000552301 RBM38Q9H0Z9 239 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-216ENST00000552301 FOXA2Q9Y261 457 aaPredicted RBP14.48□□□□□ -0.09
PRPF40B-216ENST00000552301 FBXO7Q9Y3I1 522 aa14.48□□□□□ -0.09
PRPF40B-216ENST00000552301 HRASP01112 189 aa14.47□□□□□ -0.09
PRPF40B-216ENST00000552301 CRYGBP07316 175 aa14.47□□□□□ -0.09
PRPF40B-216ENST00000552301 SAA1P0DJI8 122 aaPredicted RBP14.47□□□□□ -0.09
PRPF40B-216ENST00000552301 CD40LGP29965 261 aa14.47□□□□□ -0.09
PRPF40B-216ENST00000552301 TAS2R19P59542 299 aa14.47□□□□□ -0.09
PRPF40B-216ENST00000552301 DGCR2P98153 550 aa14.47□□□□□ -0.09
PRPF40B-216ENST00000552301 SSBP1Q04837 148 aaKnown RBP14.47□□□□□ -0.09
PRPF40B-216ENST00000552301 LPCAT3Q6P1A2 487 aa14.47□□□□□ -0.09
PRPF40B-216ENST00000552301 IDO2Q6ZQW0 420 aa14.47□□□□□ -0.09
PRPF40B-216ENST00000552301 RNF152Q8N8N0 203 aa14.47□□□□□ -0.09
PRPF40B-216ENST00000552301 AIFM2Q9BRQ8 373 aa14.47□□□□□ -0.09
PRPF40B-216ENST00000552301 GPR31O00270 319 aa14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 RBFOX2O43251 390 aaKnown RBP eCLIP14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 PSMB8P28062 276 aa14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 PPIFP30405 207 aaKnown RBP14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 GNRHRP30968 328 aa14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 S100A5P33763 92 aa14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 PJVKQ0ZLH3 352 aa14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 TNXAQ16473 311 aa14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 PRSS8Q16651 343 aa14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 C8orf86Q6ZUL3 223 aa14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 LFNGQ8NES3 379 aa14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 CD300LFQ8TDQ1 290 aa14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 SMIM4Q8WVI0 70 aa14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 PHB2Q99623 299 aa14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 NXF2Q9GZY0 626 aaKnown RBP14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 NUBP2Q9Y5Y2 271 aa14.46□□□□□ -0.09
PRPF40B-216ENST00000552301 ARPC1BO15143 372 aaKnown RBP14.45□□□□□ -0.1
PRPF40B-216ENST00000552301 CD3DP04234 171 aa14.45□□□□□ -0.1
PRPF40B-216ENST00000552301 RLN1P04808 185 aa14.45□□□□□ -0.1
PRPF40B-216ENST00000552301 CD33P20138 364 aa14.45□□□□□ -0.1
PRPF40B-216ENST00000552301 AKIRIN2Q53H80 203 aa14.45□□□□□ -0.1
PRPF40B-216ENST00000552301 MMD2Q8IY49 270 aa14.45□□□□□ -0.1
PRPF40B-216ENST00000552301 ARRDC1Q8N5I2 433 aa14.45□□□□□ -0.1
PRPF40B-216ENST00000552301 TMEM229BQ8NBD8 167 aa14.45□□□□□ -0.1
PRPF40B-216ENST00000552301 MINDY2Q8NBR6 621 aa14.45□□□□□ -0.1
PRPF40B-216ENST00000552301 OR5M8Q8NGP6 311 aa14.45□□□□□ -0.1
PRPF40B-216ENST00000552301 TINAGL1Q9GZM7 467 aaPredicted RBP14.45□□□□□ -0.1
PRPF40B-216ENST00000552301 FABP12A6NFH5 140 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 CTDSPLO15194 276 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 MPPED1O15442 326 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 RAMP3O60896 148 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 OR2A4O95047 310 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 RAB3DO95716 219 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 IGLV1-40P01703 118 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 EGR2P11161 476 aaPredicted RBP14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 PGAM2P15259 253 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 TNFSF8P32971 234 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 CDX1P47902 265 aaPredicted RBP14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 PHLDA2Q53GA4 152 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 C18orf65Q6ZTR6 163 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 SSX9Q7RTT3 188 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 SLC38A6Q8IZM9 456 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 VKORC1L1Q8N0U8 176 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 RHOVQ96L33 236 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 OR2A7Q96R45 310 aa14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 ZNF430Q9H8G1 570 aaPredicted RBP14.44□□□□□ -0.1
PRPF40B-216ENST00000552301 PGLYRP1O75594 196 aaPredicted RBP14.43□□□□□ -0.1
PRPF40B-216ENST00000552301 HPRT1P00492 218 aa14.43□□□□□ -0.1
PRPF40B-216ENST00000552301 ERVK-16P61578 105 aa14.43□□□□□ -0.1
PRPF40B-216ENST00000552301 C19orf54Q5BKX5 351 aa14.43□□□□□ -0.1
PRPF40B-216ENST00000552301 STEAP1BQ6NZ63 245 aa14.43□□□□□ -0.1
PRPF40B-216ENST00000552301 SRSF12Q8WXF0 261 aaKnown RBP14.43□□□□□ -0.1
PRPF40B-216ENST00000552301 TMEM68Q96MH6 324 aa14.43□□□□□ -0.1
PRPF40B-216ENST00000552301 KLK15Q9H2R5 256 aa14.43□□□□□ -0.1
PRPF40B-216ENST00000552301 ZNF355PQ9NSJ1 428 aa14.43□□□□□ -0.1
PRPF40B-216ENST00000552301 VSIG4Q9Y279 399 aa14.43□□□□□ -0.1
PRPF40B-216ENST00000552301 TNCP24821 2201 aa14.43□□□□□ -0.1
PRPF40B-216ENST00000552301 NOTCH3Q9UM47 2321 aa14.43□□□□□ -0.1
PRPF40B-216ENST00000552301 KBTBD11O94819 623 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 NQO2P16083 231 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 MYCNOSP40205 109 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 RAB9AP51151 201 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 UCP3P55916 312 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 BRWD1-AS2P59051 145 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 TAS2R31P59538 309 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 SSBP2P81877 361 aaPredicted RBP14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 MEF2DQ14814 521 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 SCGB2B2Q4G0G5 96 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 C4orf3Q8WVX3 66 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 UBE2E2Q96LR5 201 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 PLEKHA2Q9HB19 425 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 HRASLSQ9HDD0 168 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 COMMD9Q9P000 198 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 NDUFA13Q9P0J0 144 aa14.42□□□□□ -0.1
PRPF40B-216ENST00000552301 PKD1L1Q8TDX9 2849 aa14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 SOX15O60248 233 aa14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 CD74P04233 296 aa14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 F2RP25116 425 aa14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 PPP5CP53041 499 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms