RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 E7EUB6 86 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 CRYZL1O95825 349 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 IFNA10P01566 189 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 AREGP15514 252 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 GPR183P32249 361 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 ADMP35318 185 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 TFPI2P48307 235 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 HLA-DRB3P79483 266 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 MRPL48Q96GC5 212 aaKnown RBP10.42□□□□□ -0.74
VPS29-209ENST00000551655 NEDD4LQ96PU5 975 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 KCNK15Q9H427 330 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 SDHAF2Q9NX18 166 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 IMPAD1Q9NX62 359 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 ZNF257Q9Y2Q1 563 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 UFC1Q9Y3C8 167 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 A0A1B0GW64 132 aa10.41□□□□□ -0.74
VPS29-209ENST00000551655 DYNC1I1O14576 645 aa10.41□□□□□ -0.74
VPS29-209ENST00000551655 ZNF207O43670 478 aaKnown RBP10.41□□□□□ -0.74
VPS29-209ENST00000551655 CD3GP09693 182 aa10.41□□□□□ -0.74
VPS29-209ENST00000551655 SAA1P0DJI8 122 aaPredicted RBP10.41□□□□□ -0.74
VPS29-209ENST00000551655 INAFM2P0DMQ5 153 aa10.41□□□□□ -0.74
VPS29-209ENST00000551655 FLOT2Q14254 428 aa10.41□□□□□ -0.74
VPS29-209ENST00000551655 UBE2DNLQ8IWF7 75 aa10.41□□□□□ -0.74
VPS29-209ENST00000551655 NICN1Q9BSH3 213 aa10.41□□□□□ -0.74
VPS29-209ENST00000551655 NDUFAF3Q9BU61 184 aa10.41□□□□□ -0.74
VPS29-209ENST00000551655 OR2D2Q9H210 308 aa10.41□□□□□ -0.74
VPS29-209ENST00000551655 AMBNQ9NP70 447 aa10.41□□□□□ -0.74
VPS29-209ENST00000551655 RDH8Q9NYR8 311 aa10.41□□□□□ -0.74
VPS29-209ENST00000551655 NACAE9PAV3 2078 aa10.41□□□□□ -0.74
VPS29-209ENST00000551655 ACTL6BO94805 426 aa10.4□□□□□ -0.74
VPS29-209ENST00000551655 REG1AP05451 166 aa10.4□□□□□ -0.74
VPS29-209ENST00000551655 IL6RP08887 468 aaPredicted RBP10.4□□□□□ -0.74
VPS29-209ENST00000551655 HOXB6P17509 224 aaKnown RBP10.4□□□□□ -0.74
VPS29-209ENST00000551655 GALP22466 123 aa10.4□□□□□ -0.74
VPS29-209ENST00000551655 HTR2CP28335 458 aa10.4□□□□□ -0.74
VPS29-209ENST00000551655 MRPL28Q13084 256 aaKnown RBP10.4□□□□□ -0.74
VPS29-209ENST00000551655 CBX3Q13185 183 aa10.4□□□□□ -0.74
VPS29-209ENST00000551655 C12orf74Q32Q52 190 aa10.4□□□□□ -0.74
VPS29-209ENST00000551655 GLT8D1Q68CQ7 371 aa10.4□□□□□ -0.74
VPS29-209ENST00000551655 LAMTOR1Q6IAA8 161 aa10.4□□□□□ -0.74
VPS29-209ENST00000551655 AMIGO2Q86SJ2 522 aa10.4□□□□□ -0.74
VPS29-209ENST00000551655 FYTTD1Q96QD9 318 aaKnown RBP10.4□□□□□ -0.74
VPS29-209ENST00000551655 SRRM2Q9UQ35 2752 aaKnown RBP10.4□□□□□ -0.74
VPS29-209ENST00000551655 IGKV3-7A0A075B6H7 116 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 TRBV5-5A0A0J9YX44 114 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 DPPA5A6NC42 116 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 NPIPB5A8MRT5 1133 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 CD74P04233 296 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 MYOD1P15172 320 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 ELLP55199 621 aaPredicted RBP10.39□□□□□ -0.75
VPS29-209ENST00000551655 ATP6AP1Q15904 470 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 RTL8BQ17RB0 113 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 RPL22L1Q6P5R6 122 aaKnown RBP10.39□□□□□ -0.75
VPS29-209ENST00000551655 MOB1BQ7L9L4 216 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 SSX9Q7RTT3 188 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 SLC25A42Q86VD7 318 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.39□□□□□ -0.75
VPS29-209ENST00000551655 TMEM190Q8WZ59 177 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 AK3Q9UIJ7 227 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 ARL2BPQ9Y2Y0 163 aa10.39□□□□□ -0.75
VPS29-209ENST00000551655 AGRNO00468 2067 aa10.38□□□□□ -0.75
VPS29-209ENST00000551655 LINC00473A8K010 186 aa10.38□□□□□ -0.75
VPS29-209ENST00000551655 EPM2AB3EWF7 344 aa10.38□□□□□ -0.75
VPS29-209ENST00000551655 DCTN3O75935 186 aa10.38□□□□□ -0.75
VPS29-209ENST00000551655 LIMS3P0CW19 117 aa10.38□□□□□ -0.75
VPS29-209ENST00000551655 LIMS4P0CW20 117 aa10.38□□□□□ -0.75
VPS29-209ENST00000551655 CDK10Q15131 360 aa10.38□□□□□ -0.75
VPS29-209ENST00000551655 OR2G6Q5TZ20 316 aa10.38□□□□□ -0.75
VPS29-209ENST00000551655 VKORC1L1Q8N0U8 176 aa10.38□□□□□ -0.75
VPS29-209ENST00000551655 OR52I1Q8NGK6 324 aa10.38□□□□□ -0.75
VPS29-209ENST00000551655 TRUB1Q8WWH5 349 aaKnown RBP10.38□□□□□ -0.75
VPS29-209ENST00000551655 ZNF436Q9C0F3 470 aaPredicted RBP10.38□□□□□ -0.75
VPS29-209ENST00000551655 CKLFQ9UBR5 152 aa10.38□□□□□ -0.75
VPS29-209ENST00000551655 A0A0A6YYD4 124 aa10.37□□□□□ -0.75
VPS29-209ENST00000551655 LALBAP00709 142 aa10.37□□□□□ -0.75
VPS29-209ENST00000551655 GIG44P09565 113 aaPredicted RBP10.37□□□□□ -0.75
VPS29-209ENST00000551655 PSMB6P28072 239 aa10.37□□□□□ -0.75
VPS29-209ENST00000551655 RPS11P62280 158 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS29-209ENST00000551655 MEDAGQ5VYS4 303 aa10.37□□□□□ -0.75
VPS29-209ENST00000551655 PLET1Q6UQ28 207 aa10.37□□□□□ -0.75
VPS29-209ENST00000551655 MMD2Q8IY49 270 aa10.37□□□□□ -0.75
VPS29-209ENST00000551655 ZFP41Q8N8Y5 198 aa10.37□□□□□ -0.75
VPS29-209ENST00000551655 OR6M1Q8NGM8 313 aa10.37□□□□□ -0.75
VPS29-209ENST00000551655 ZNF502Q8TBZ5 544 aa10.37□□□□□ -0.75
VPS29-209ENST00000551655 RNF2Q99496 336 aa10.37□□□□□ -0.75
VPS29-209ENST00000551655 C20orf24Q9BUV8 137 aa10.37□□□□□ -0.75
VPS29-209ENST00000551655 Q9N2K0 584 aa10.37□□□□□ -0.75
VPS29-209ENST00000551655 X6R8D5 127 aa10.37□□□□□ -0.75
VPS29-209ENST00000551655 FLG2Q5D862 2391 aaPredicted RBP10.36□□□□□ -0.75
VPS29-209ENST00000551655 IGLV11-55A0A075B6I3 123 aa10.36□□□□□ -0.75
VPS29-209ENST00000551655 TRBV7-1A0A0A6YYK4 115 aa10.36□□□□□ -0.75
VPS29-209ENST00000551655 C15orf61A6NNL5 157 aa10.36□□□□□ -0.75
VPS29-209ENST00000551655 IFNA21P01568 189 aa10.36□□□□□ -0.75
VPS29-209ENST00000551655 IFNA17P01571 189 aa10.36□□□□□ -0.75
VPS29-209ENST00000551655 GSTT2P0CG29 244 aa10.36□□□□□ -0.75
VPS29-209ENST00000551655 GSTT2BP0CG30 244 aa10.36□□□□□ -0.75
VPS29-209ENST00000551655 RPS27AP62979 156 aaKnown RBP10.36□□□□□ -0.75
VPS29-209ENST00000551655 LEMD1Q68G75 181 aa10.36□□□□□ -0.75
VPS29-209ENST00000551655 GBGT1Q8N5D6 347 aa10.36□□□□□ -0.75
VPS29-209ENST00000551655 GGHQ92820 318 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms