RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TMA7Q9Y2S6 64 aaKnown RBP9.41□□□□□ -0.9
RAB5C-208ENST00000551338 FBXO7Q9Y3I1 522 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 A0A1B0GW64 132 aa9.4□□□□□ -0.9
RAB5C-208ENST00000551338 IL6RP08887 468 aaPredicted RBP9.4□□□□□ -0.9
RAB5C-208ENST00000551338 SFTA3P0C7M3 94 aa9.4□□□□□ -0.9
RAB5C-208ENST00000551338 BTN1A1Q13410 526 aa9.4□□□□□ -0.9
RAB5C-208ENST00000551338 VWC2Q2TAL6 325 aa9.4□□□□□ -0.9
RAB5C-208ENST00000551338 C4orf17Q53FE4 359 aa9.4□□□□□ -0.9
RAB5C-208ENST00000551338 ZNF429Q86V71 674 aa9.4□□□□□ -0.9
RAB5C-208ENST00000551338 PUSL1Q8N0Z8 303 aaKnown RBP9.4□□□□□ -0.9
RAB5C-208ENST00000551338 C8orf31Q8N9H6 132 aa9.4□□□□□ -0.9
RAB5C-208ENST00000551338 OR4A16Q8NH70 328 aa9.4□□□□□ -0.9
RAB5C-208ENST00000551338 TAF15Q92804 592 aaKnown RBP eCLIP9.4□□□□□ -0.9
RAB5C-208ENST00000551338 MRPL20Q9BYC9 149 aaKnown RBP9.4□□□□□ -0.9
RAB5C-208ENST00000551338 NKX6-2Q9C056 277 aaPredicted RBP9.4□□□□□ -0.9
RAB5C-208ENST00000551338 CBLN4Q9NTU7 201 aa9.4□□□□□ -0.9
RAB5C-208ENST00000551338 TCF19Q9Y242 345 aa9.4□□□□□ -0.9
RAB5C-208ENST00000551338 TIMM9Q9Y5J7 89 aa9.4□□□□□ -0.9
RAB5C-208ENST00000551338 BSNQ9UPA5 3926 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 IGF2RP11717 2491 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 RP1L1Q8IWN7 2480 aaPredicted RBP9.39□□□□□ -0.91
RAB5C-208ENST00000551338 A0A087X0M5 115 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 TRBV23-1A0A0A0MS06 115 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 A0A1B0GV50 99 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 A0A1B0GX30 115 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 TMEM8BA6NDV4 472 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 DNASE2O00115 360 aaPredicted RBP9.39□□□□□ -0.91
RAB5C-208ENST00000551338 LY86O95711 162 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 IFNA17P01571 189 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 H2AFB1P0C5Y9 115 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 UQCRFS1P47985 274 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 CCL20P78556 96 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 AVPI1Q5T686 147 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 DHRS7BQ6IAN0 325 aaPredicted RBP9.39□□□□□ -0.91
RAB5C-208ENST00000551338 FAM71F2Q6NXP2 309 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 ZNF841Q6ZN19 808 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 C11orf42Q8N5U0 333 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.39□□□□□ -0.91
RAB5C-208ENST00000551338 OR10P1Q8NGE3 313 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 OR13D1Q8NGV5 346 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 PINX1Q96BK5 328 aaKnown RBP9.39□□□□□ -0.91
RAB5C-208ENST00000551338 RAB39BQ96DA2 213 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 RHOVQ96L33 236 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 HIPK2Q9H2X6 1198 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 VSIRQ9H7M9 311 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 FOXA2Q9Y261 457 aaPredicted RBP9.39□□□□□ -0.91
RAB5C-208ENST00000551338 ROS1P08922 2347 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 DCHS1Q96JQ0 3298 aa9.39□□□□□ -0.91
RAB5C-208ENST00000551338 A0A1W2PPR1 153 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 BTBD17A6NE02 478 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 PRSS46E5RG02 174 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 J3QR06 171 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 UPK2O00526 184 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 GPR37O15354 613 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 SCAF4O95104 1147 aaKnown RBP9.38□□□□□ -0.91
RAB5C-208ENST00000551338 F12P00748 615 aaPredicted RBP9.38□□□□□ -0.91
RAB5C-208ENST00000551338 HRASP01112 189 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 MDKP21741 143 aaPredicted RBP9.38□□□□□ -0.91
RAB5C-208ENST00000551338 GNB2P62879 340 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 PEA15Q15121 130 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 ZNF726P1Q15940 193 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 RTL8BQ17RB0 113 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 SSX7Q7RTT5 188 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 CENPVQ7Z7K6 275 aaPredicted RBP9.38□□□□□ -0.91
RAB5C-208ENST00000551338 SVBPQ8N300 66 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 TMEM170AQ8WVE7 144 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 ITLN2Q8WWU7 325 aaPredicted RBP9.38□□□□□ -0.91
RAB5C-208ENST00000551338 ST6GALNAC6Q969X2 333 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 NABP2Q9BQ15 211 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 RPRMQ9NS64 109 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 TMEM14BQ9NUH8 114 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 KIAA1456Q9P272 454 aa9.38□□□□□ -0.91
RAB5C-208ENST00000551338 TLN1Q9Y490 2541 aaKnown RBP9.37□□□□□ -0.91
RAB5C-208ENST00000551338 COL6A6A6NMZ7 2263 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 FAM74A7A6NL05 159 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 SRRM4A7MD48 611 aaKnown RBP9.37□□□□□ -0.91
RAB5C-208ENST00000551338 H0YJW9 148 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 HBE1P02100 147 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 APOA2P02652 100 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 SOD3P08294 240 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 IGHV1-8P0DP01 117 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 MYOD1P15172 320 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 FGF7P21781 194 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 GNLYP22749 145 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 NPBWR1P48145 328 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 HOXA1P49639 335 aaPredicted RBP9.37□□□□□ -0.91
RAB5C-208ENST00000551338 PPT1P50897 306 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 ZNF137PP52743 207 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 HSPE1P61604 102 aaKnown RBP9.37□□□□□ -0.91
RAB5C-208ENST00000551338 SERF2P84101 59 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 DIAPH2-AS1Q14236 149 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 FAM74A3Q4VXF1 159 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 TMEM41BQ5BJD5 291 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 ACSM6Q6P461 480 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 DTX2Q86UW9 622 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 OR5AN1Q8NGI8 311 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 OR9G1Q8NH87 305 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 CLCC1Q96S66 551 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 PBDC1Q9BVG4 233 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 RAB1BQ9H0U4 201 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms