RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 ZBTB8BQ8NAP8 495 aaPredicted RBP6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 OR5AN1Q8NGI8 311 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 GPR146Q96CH1 333 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 C2orf50Q96LR7 162 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 SLC35D1Q9NTN3 355 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 HIF1ANQ9NWT6 349 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 PRELID3BQ9Y3B1 194 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 AMMECR1Q9Y4X0 333 aaPredicted RBP6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 CELSR1Q9NYQ6 3014 aa6.52□□□□□ -1.36
DEPDC4-207ENST00000549249 ZNF469Q96JG9 3925 aaPredicted RBP6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 PLXNB1O43157 2135 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 IGHV3-72A0A0B4J1Y9 119 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 TRAV40A0A0B4J280 105 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 IGHV1-3A0A0C4DH29 117 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 CENPVL3A0A0U1RRI6 287 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 CRYZL1O95825 349 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 IFNA21P01568 189 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 C1QBP02746 253 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 VDAC1P21796 283 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 G6PCP35575 357 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 UBE2E1P51965 193 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 NKX2-5P52952 324 aaPredicted RBP6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 IAH1Q2TAA2 248 aaPredicted RBP6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 MIDNQ504T8 468 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 FBLN7Q53RD9 439 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 MINOS1Q5TGZ0 78 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 RUSC1-AS1Q66K80 236 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 TGIF2LXQ8IUE1 241 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 OR11H4Q8NGC9 324 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 OR4D5Q8NGN0 318 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 OR2T35Q8NGX2 323 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 OR4S2Q8NH73 311 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 CD300LFQ8TDQ1 290 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 CFHR4Q92496 578 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 LSM10Q969L4 123 aaKnown RBP6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 RPEQ96AT9 228 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 PPP1R14BQ96C90 147 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 R3HDM4Q96D70 268 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 PDCD10Q9BUL8 212 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 NMES1Q9C002 83 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 PLEKHA2Q9HB19 425 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 COMMD9Q9P000 198 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 DPM3Q9P2X0 92 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 TMED3Q9Y3Q3 217 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 AUP1Q9Y679 476 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 MINOS1-NBL1R4GNA1 71 aa6.52□□□□□ -1.37
DEPDC4-207ENST00000549249 IGHV3OR16-10A0A075B7F0 116 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 MARCH11A6NNE9 402 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 SRRM4A7MD48 611 aaKnown RBP6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 LEUTXA8MZ59 168 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 H0YIZ8 118 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 TIMM23O14925 209 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 NPFFO15130 113 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 PITX3O75364 302 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 FBXO24O75426 580 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 HPRT1P00492 218 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 KRASP01116 189 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 APOA2P02652 100 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 GAPDHP04406 335 aaKnown RBP6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 HNRNPCP07910 306 aaKnown RBP eCLIP6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 OR9G9P0C7N8 305 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 IGHV4-38-2P0DP08 117 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 GATA3P23771 443 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 SAA4P35542 130 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 AKR1C2P52895 323 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 RAB32Q13637 225 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 POU2AF1Q16633 256 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 TMEM177Q53S58 311 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 KLF17Q5JT82 389 aaPredicted RBP6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 PDPNQ86YL7 162 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 VKORC1L1Q8N0U8 176 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 PPP1R1CQ8WVI7 109 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 ASB13Q8WXK3 278 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 RANBP3Q9H6Z4 567 aaPredicted RBP6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 CACNG5Q9UF02 275 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 WASHC3Q9Y3C0 194 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 TBL2Q9Y4P3 447 aaKnown RBP6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 HILPDAQ9Y5L2 63 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 MMP24Q9Y5R2 645 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 AKAP9Q99996 3911 aa6.51□□□□□ -1.37
DEPDC4-207ENST00000549249 CSPG4Q6UVK1 2322 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 NIPBLQ6KC79 2804 aaeCLIP6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 ZFHX3Q15911 3703 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 TRAV3A0A0B4J244 114 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 IGHV1-69DA0A0B4J2H0 117 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 A0A1B0GU03 582 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 TXNL1O43396 289 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 NXPH3O95157 252 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 VENTXO95231 258 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 MPC2O95563 127 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 TGFAP01135 160 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 IGLV2-23P01705 113 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 IGHV1-69P01742 117 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 MBPP02686 304 aaPredicted RBP6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 RRASP10301 218 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 SLC25A6P12236 298 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 NQO2P16083 231 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 CEACAM3P40198 252 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 GZMKP49863 264 aa6.5□□□□□ -1.37
DEPDC4-207ENST00000549249 CYCSP99999 105 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms