RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 C15orf40Q8WUR7 153 aa14.62□□□□□ -0.07
PRPF40B-206ENST00000547764 SLIRPQ9GZT3 109 aaKnown RBP14.62□□□□□ -0.07
PRPF40B-206ENST00000547764 SOX15O60248 233 aa14.61□□□□□ -0.07
PRPF40B-206ENST00000547764 AKIRIN2Q53H80 203 aa14.61□□□□□ -0.07
PRPF40B-206ENST00000547764 C1QL4Q86Z23 238 aa14.61□□□□□ -0.07
PRPF40B-206ENST00000547764 MYOZ3Q8TDC0 251 aa14.61□□□□□ -0.07
PRPF40B-206ENST00000547764 FOXA2Q9Y261 457 aaPredicted RBP14.61□□□□□ -0.07
PRPF40B-206ENST00000547764 MEGF8Q7Z7M0 2845 aa14.61□□□□□ -0.07
PRPF40B-206ENST00000547764 TNCP24821 2201 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 CCDC160A6NGH7 325 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 G3V4G9 280 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 SAA1P0DJI8 122 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 CD33P20138 364 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 KIR2DS2P43631 304 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 RAB9AP51151 201 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 TSPAN5P62079 268 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 KIAA0141Q14154 515 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 PRSS8Q16651 343 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 ACTBL2Q562R1 376 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 VKORC1L1Q8N0U8 176 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 BORCS5Q969J3 196 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 DIRAS2Q96HU8 199 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 C6orf62Q9GZU0 229 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 FXYD6Q9H0Q3 95 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 MTFP1Q9UDX5 166 aa14.6□□□□□ -0.07
PRPF40B-206ENST00000547764 M0QYG6 137 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 RAMP3O60896 148 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 MYCNOSP40205 109 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 DEFA6Q01524 100 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 CATR1Q13166 79 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 VAX1Q5SQQ9 334 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 SAMD5Q5TGI4 173 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 MRPL41Q8IXM3 137 aaKnown RBP14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 SPAG16Q8N0X2 631 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 LINC00482Q8N8I6 264 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 ZNF491Q8N8L2 437 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 CASTOR1Q8WTX7 329 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 FCAMRQ8WWV6 532 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 RAX2Q96IS3 184 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 DUX3Q96PT4 197 aa14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 RBM38Q9H0Z9 239 aaKnown RBP14.59□□□□□ -0.07
PRPF40B-206ENST00000547764 DGCR2P98153 550 aa14.58□□□□□ -0.08
PRPF40B-206ENST00000547764 TNXAQ16473 311 aa14.58□□□□□ -0.08
PRPF40B-206ENST00000547764 DEFB136Q30KP8 78 aa14.58□□□□□ -0.08
PRPF40B-206ENST00000547764 OXLD1Q5BKU9 147 aa14.58□□□□□ -0.08
PRPF40B-206ENST00000547764 AADACL3Q5VUY0 350 aa14.58□□□□□ -0.08
PRPF40B-206ENST00000547764 OR5M8Q8NGP6 311 aa14.58□□□□□ -0.08
PRPF40B-206ENST00000547764 OR51H1Q8NH63 302 aa14.58□□□□□ -0.08
PRPF40B-206ENST00000547764 C4orf3Q8WVX3 66 aa14.58□□□□□ -0.08
PRPF40B-206ENST00000547764 UBE2E2Q96LR5 201 aa14.58□□□□□ -0.08
PRPF40B-206ENST00000547764 P2RX4Q99571 388 aa14.58□□□□□ -0.08
PRPF40B-206ENST00000547764 NXF2Q9GZY0 626 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-206ENST00000547764 ZNF430Q9H8G1 570 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-206ENST00000547764 GABARAPH6UMI1 98 aa14.57□□□□□ -0.08
PRPF40B-206ENST00000547764 CCL24O00175 119 aa14.57□□□□□ -0.08
PRPF40B-206ENST00000547764 RBFOX2O43251 390 aaKnown RBP eCLIP14.57□□□□□ -0.08
PRPF40B-206ENST00000547764 PGLYRP1O75594 196 aaPredicted RBP14.57□□□□□ -0.08
PRPF40B-206ENST00000547764 CD3DP04234 171 aa14.57□□□□□ -0.08
PRPF40B-206ENST00000547764 PYHIN1Q6K0P9 492 aa14.57□□□□□ -0.08
PRPF40B-206ENST00000547764 MCFD2Q8NI22 146 aa14.57□□□□□ -0.08
PRPF40B-206ENST00000547764 RHOVQ96L33 236 aa14.57□□□□□ -0.08
PRPF40B-206ENST00000547764 TINAGL1Q9GZM7 467 aaPredicted RBP14.57□□□□□ -0.08
PRPF40B-206ENST00000547764 GNB4Q9HAV0 340 aa14.57□□□□□ -0.08
PRPF40B-206ENST00000547764 RSL24D1Q9UHA3 163 aaKnown RBP14.57□□□□□ -0.08
PRPF40B-206ENST00000547764 VSIG4Q9Y279 399 aa14.57□□□□□ -0.08
PRPF40B-206ENST00000547764 MSGN1A6NI15 193 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 GPR31O00270 319 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 CREBL2O60519 120 aaPredicted RBP14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 KBTBD11O94819 623 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 OR2A4O95047 310 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 HRASP01112 189 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 RLN1P04808 185 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 IGLL1P15814 213 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 MRPS10P82664 201 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 IL18Q14116 193 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 RNASE10Q5GAN6 216 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 ASPHD1Q5U4P2 390 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 MMD2Q8IY49 270 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 CMTM1Q8IZ96 169 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 PUSL1Q8N0Z8 303 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 OR5T1Q8NG75 326 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 VSTM2AQ8TAG5 236 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 TMEM68Q96MH6 324 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 MS4A10Q96PG2 267 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 OR2A7Q96R45 310 aa14.56□□□□□ -0.08
PRPF40B-206ENST00000547764 I3L521 148 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 ACTL6BO94805 426 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 HPRT1P00492 218 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 IFNA6P05013 189 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 CD40LGP29965 261 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 TNFSF8P32971 234 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 BEAN1Q3B7T3 259 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 LPCAT3Q6P1A2 487 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 SSX9Q7RTT3 188 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 POC5Q8NA72 575 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 TMEM229BQ8NBD8 167 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 TMEM167AQ8TBQ9 72 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 CD300LFQ8TDQ1 290 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 SMIM4Q8WVI0 70 aa14.55□□□□□ -0.08
PRPF40B-206ENST00000547764 SRSF12Q8WXF0 261 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms