RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PARP11Q9NR21 331 aa13.24□□□□□ -0.29
CCDC38-203ENST00000546803 LINC00527Q9UJ94 153 aa13.24□□□□□ -0.29
CCDC38-203ENST00000546803 M0QZ24 198 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 ATP6V0E1O15342 81 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 HPRT1P00492 218 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 CA2P00918 260 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 OPN1MWP04001 364 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 RLN1P04808 185 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 OPN1MW2P0DN77 364 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 OPN1MW3P0DN78 364 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 F2RP25116 425 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 FAUP35544 74 aaKnown RBP13.23□□□□□ -0.29
CCDC38-203ENST00000546803 CRIP2P52943 208 aaPredicted RBP13.23□□□□□ -0.29
CCDC38-203ENST00000546803 CD83Q01151 205 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 CNPY1Q3B7I2 92 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 PHLDA2Q53GA4 152 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 ZNF329Q86UD4 541 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 PLEKHA2Q9HB19 425 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 TPSG1Q9NRR2 321 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 FAM212BQ9NTI7 297 aaPredicted RBP13.23□□□□□ -0.29
CCDC38-203ENST00000546803 SLC2A8Q9NY64 477 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 STAB1Q9NY15 2570 aa13.23□□□□□ -0.29
CCDC38-203ENST00000546803 RAMP3O60896 148 aa13.22□□□□□ -0.29
CCDC38-203ENST00000546803 SAA1P0DJI8 122 aaPredicted RBP13.22□□□□□ -0.29
CCDC38-203ENST00000546803 TAS2R31P59538 309 aa13.22□□□□□ -0.29
CCDC38-203ENST00000546803 RND3P61587 244 aa13.22□□□□□ -0.29
CCDC38-203ENST00000546803 ZNF45Q02386 682 aa13.22□□□□□ -0.29
CCDC38-203ENST00000546803 TMEM267Q0VDI3 215 aaPredicted RBP13.22□□□□□ -0.29
CCDC38-203ENST00000546803 KLF9Q13886 244 aaPredicted RBP13.22□□□□□ -0.29
CCDC38-203ENST00000546803 FXYD3Q14802 87 aa13.22□□□□□ -0.29
CCDC38-203ENST00000546803 SURF2Q15527 256 aaPredicted RBP13.22□□□□□ -0.29
CCDC38-203ENST00000546803 PRSS8Q16651 343 aa13.22□□□□□ -0.29
CCDC38-203ENST00000546803 FAAP20Q6NZ36 180 aa13.22□□□□□ -0.29
CCDC38-203ENST00000546803 TEX38Q6PEX7 206 aa13.22□□□□□ -0.29
CCDC38-203ENST00000546803 NDUFA11Q86Y39 141 aa13.22□□□□□ -0.29
CCDC38-203ENST00000546803 TOMM5Q8N4H5 51 aa13.22□□□□□ -0.29
CCDC38-203ENST00000546803 RHOVQ96L33 236 aa13.22□□□□□ -0.29
CCDC38-203ENST00000546803 CITED2Q99967 270 aaPredicted RBP13.22□□□□□ -0.29
CCDC38-203ENST00000546803 SLC2A9Q9NRM0 540 aa13.22□□□□□ -0.29
CCDC38-203ENST00000546803 SCP2D1Q9UJQ7 156 aa13.22□□□□□ -0.29
CCDC38-203ENST00000546803 TRAV41A0A0B4J266 112 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 OR2A4O95047 310 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 CNIH1O95406 144 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 NQO2P16083 231 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 PPP5CP53041 499 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 NDPQ00604 133 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 CFHR3Q02985 330 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 POU2AF1Q16633 256 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 C2orf68Q2NKX9 166 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 TCTEX1D4Q5JR98 221 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 C10orf99Q6UWK7 81 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 TBC1D26Q86UD7 250 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 OR51S1Q8NGJ8 323 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 ABHD5Q8WTS1 349 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 ARPC1AQ92747 370 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 OR2A7Q96R45 310 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 COMMD9Q9P000 198 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 WSB1Q9Y6I7 421 aa13.21□□□□□ -0.29
CCDC38-203ENST00000546803 TCRBV4S1A1TA0A5B7 111 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 MPPED1O15442 326 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 ACTL6BO94805 426 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 IGHG4P01861 327 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 CTSDP07339 412 aaPredicted RBP13.2□□□□□ -0.3
CCDC38-203ENST00000546803 ELANEP08246 267 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 PIGPP57054 158 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 PJVKQ0ZLH3 352 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 FOXE3Q13461 319 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 AKIRIN2Q53H80 203 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 IDO2Q6ZQW0 420 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 MMD2Q8IY49 270 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 PUSL1Q8N0Z8 303 aaKnown RBP13.2□□□□□ -0.3
CCDC38-203ENST00000546803 CCDC71LQ8N9Z2 235 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 OR13C8Q8NGS7 320 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 OR4A5Q8NH83 315 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 MARCH1Q8TCQ1 289 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 SCGB3A2Q96PL1 93 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 HRASLSQ9HDD0 168 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 MCUBQ9NWR8 336 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 TSSC4Q9Y5U2 329 aaPredicted RBP13.2□□□□□ -0.3
CCDC38-203ENST00000546803 NUBP2Q9Y5Y2 271 aa13.2□□□□□ -0.3
CCDC38-203ENST00000546803 G3V318 75 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 ARPC1BO15143 372 aaKnown RBP13.19□□□□□ -0.3
CCDC38-203ENST00000546803 EGR2P11161 476 aaPredicted RBP13.19□□□□□ -0.3
CCDC38-203ENST00000546803 PPIFP30405 207 aaKnown RBP13.19□□□□□ -0.3
CCDC38-203ENST00000546803 LPAR6P43657 344 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 GNB1P62873 340 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 MRGPRG-AS1Q2M3A8 158 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 CXorf66Q5JRM2 361 aaPredicted RBP13.19□□□□□ -0.3
CCDC38-203ENST00000546803 PRR31Q5SQ13 230 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 TRIQKQ629K1 86 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 VKORC1L1Q8N0U8 176 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 CADM3Q8N126 398 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 RNF152Q8N8N0 203 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 MINDY2Q8NBR6 621 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 TMEM167AQ8TBQ9 72 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 MRGPRFQ96AM1 343 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 TMEM68Q96MH6 324 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 ZNF430Q9H8G1 570 aaPredicted RBP13.19□□□□□ -0.3
CCDC38-203ENST00000546803 ZFP57Q9NU63 452 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 BET1LQ9NYM9 111 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms