RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 IGF1P05019 195 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 NQO2P16083 231 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 CX3CL1P78423 397 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 ZNF45Q02386 682 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 FXYD3Q14802 87 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 NSUN5P1Q3KNT7 163 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 PHLDA2Q53GA4 152 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 ZNF57Q68EA5 555 aaPredicted RBP13.82□□□□□ -0.2
CD9-211ENST00000546073 CCDC190Q86UF4 302 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 MMD2Q8IY49 270 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 GDPD1Q8N9F7 314 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 DEDD2Q8WXF8 326 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 ARPC1AQ92747 370 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 C5orf30Q96GV9 206 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 TMEM68Q96MH6 324 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 NOL4LQ96MY1 436 aaPredicted RBP13.82□□□□□ -0.2
CD9-211ENST00000546073 RSRP1Q9BUV0 290 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 HRASLSQ9HDD0 168 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 ZFP57Q9NU63 452 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 IGHV7-81A0A0B4J1V7 117 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 ANKRD20A5PA0PJZ0 165 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 CENPXA8MT69 81 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 OR2A4O95047 310 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 IGLV2-14P01704 120 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 SERPINE2P07093 398 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 ELANEP08246 267 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 CD28P10747 220 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 F2RP25116 425 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 ETV6P41212 452 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 PPP5CP53041 499 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 TAS2R31P59538 309 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 RPL30P62888 115 aaKnown RBP13.81□□□□□ -0.2
CD9-211ENST00000546073 SRSF4Q08170 494 aaKnown RBP13.81□□□□□ -0.2
CD9-211ENST00000546073 ECSCRQ19T08 205 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 ZNF329Q86UD4 541 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 OR4A5Q8NH83 315 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 GRPEL2Q8TAA5 225 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 OR2A7Q96R45 310 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 SOSTQ9BQB4 213 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 HSPB9Q9BQS6 159 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 FXYD6Q9H0Q3 95 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 PLEKHA2Q9HB19 425 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 ZNF580Q9UK33 172 aa13.81□□□□□ -0.2
CD9-211ENST00000546073 NUDT19A8MXV4 375 aa13.8□□□□□ -0.2
CD9-211ENST00000546073 ATP6V0E1O15342 81 aa13.8□□□□□ -0.2
CD9-211ENST00000546073 PF4V1P10720 104 aa13.8□□□□□ -0.2
CD9-211ENST00000546073 SURF2Q15527 256 aaPredicted RBP13.8□□□□□ -0.2
CD9-211ENST00000546073 TNXAQ16473 311 aa13.8□□□□□ -0.2
CD9-211ENST00000546073 UNQ5815/PRO19632Q6UWF5 114 aa13.8□□□□□ -0.2
CD9-211ENST00000546073 RHOVQ96L33 236 aa13.8□□□□□ -0.2
CD9-211ENST00000546073 ZNF355PQ9NSJ1 428 aa13.8□□□□□ -0.2
CD9-211ENST00000546073 COMMD9Q9P000 198 aa13.8□□□□□ -0.2
CD9-211ENST00000546073 WSB1Q9Y6I7 421 aa13.8□□□□□ -0.2
CD9-211ENST00000546073 TEX13DA0A0J9YY54 714 aaPredicted RBP13.79□□□□□ -0.2
CD9-211ENST00000546073 B3GALNT1O75752 331 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 SNAPC5O75971 98 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 MAS1LP35410 378 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 PIGPP57054 158 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 FOXE3Q13461 319 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 IDO2Q6ZQW0 420 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 SSX9Q7RTT3 188 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 TBC1D26Q86UD7 250 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 OR4C16Q8NGL9 310 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 S100ZQ8WXG8 99 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 SPIN2AQ99865 258 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 CITED2Q99967 270 aaPredicted RBP13.79□□□□□ -0.2
CD9-211ENST00000546073 SPIN2BQ9BPZ2 258 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 SLC2A9Q9NRM0 540 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 FAM212BQ9NTI7 297 aaPredicted RBP13.79□□□□□ -0.2
CD9-211ENST00000546073 KCNIP3Q9Y2W7 256 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 V9GYH0 126 aa13.79□□□□□ -0.2
CD9-211ENST00000546073 PIGBOS1A0A0B4J2F0 54 aa13.78□□□□□ -0.2
CD9-211ENST00000546073 A0A1W2PRX2 142 aa13.78□□□□□ -0.2
CD9-211ENST00000546073 LINC01548A6NM66 108 aa13.78□□□□□ -0.2
CD9-211ENST00000546073 FCN1O00602 326 aa13.78□□□□□ -0.2
CD9-211ENST00000546073 SAA1P0DJI8 122 aaPredicted RBP13.78□□□□□ -0.2
CD9-211ENST00000546073 SLC6A1P30531 599 aa13.78□□□□□ -0.2
CD9-211ENST00000546073 LPAR6P43657 344 aa13.78□□□□□ -0.2
CD9-211ENST00000546073 PRSS8Q16651 343 aa13.78□□□□□ -0.2
CD9-211ENST00000546073 AKIRIN2Q53H80 203 aa13.78□□□□□ -0.2
CD9-211ENST00000546073 LINC00299Q6ZSB3 139 aa13.78□□□□□ -0.2
CD9-211ENST00000546073 OR5M8Q8NGP6 311 aa13.78□□□□□ -0.2
CD9-211ENST00000546073 R3HDM4Q96D70 268 aa13.78□□□□□ -0.2
CD9-211ENST00000546073 RBMXL1Q96E39 390 aaKnown RBP13.78□□□□□ -0.2
CD9-211ENST00000546073 FOXA2Q9Y261 457 aaPredicted RBP13.78□□□□□ -0.2
CD9-211ENST00000546073 A0A1W2PN81 502 aa13.77□□□□□ -0.21
CD9-211ENST00000546073 SRRM4A7MD48 611 aaKnown RBP13.77□□□□□ -0.21
CD9-211ENST00000546073 IGLV2-23P01705 113 aa13.77□□□□□ -0.21
CD9-211ENST00000546073 PF4P02776 101 aa13.77□□□□□ -0.21
CD9-211ENST00000546073 CTSDP07339 412 aaPredicted RBP13.77□□□□□ -0.21
CD9-211ENST00000546073 RPA2P15927 270 aa13.77□□□□□ -0.21
CD9-211ENST00000546073 CHRNA7P36544 502 aa13.77□□□□□ -0.21
CD9-211ENST00000546073 KRTAP10-3P60369 221 aa13.77□□□□□ -0.21
CD9-211ENST00000546073 RND3P61587 244 aa13.77□□□□□ -0.21
CD9-211ENST00000546073 CD83Q01151 205 aa13.77□□□□□ -0.21
CD9-211ENST00000546073 EIF4EBP1Q13541 118 aaPredicted RBP13.77□□□□□ -0.21
CD9-211ENST00000546073 TRIM16LQ309B1 348 aa13.77□□□□□ -0.21
CD9-211ENST00000546073 SLC25A42Q86VD7 318 aa13.77□□□□□ -0.21
CD9-211ENST00000546073 LHFPL1Q86WI0 220 aa13.77□□□□□ -0.21
CD9-211ENST00000546073 OR4D10Q8NGI6 311 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms