RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 ZNF343Q6P1L6 599 aa15.25■□□□□ 0.03
CHD4-213ENST00000545584 ADAD2Q8NCV1 583 aaKnown RBP15.25■□□□□ 0.03
CHD4-213ENST00000545584 HSD17B10Q99714 261 aaKnown RBP15.25■□□□□ 0.03
CHD4-213ENST00000545584 SPIN2AQ99865 258 aa15.25■□□□□ 0.03
CHD4-213ENST00000545584 SPIN2BQ9BPZ2 258 aa15.25■□□□□ 0.03
CHD4-213ENST00000545584 TRAV18A0A075B6X5 111 aa15.24■□□□□ 0.03
CHD4-213ENST00000545584 SSX5O60225 188 aa15.24■□□□□ 0.03
CHD4-213ENST00000545584 CLEC2LP0C7M8 214 aa15.24■□□□□ 0.03
CHD4-213ENST00000545584 ARPC4P59998 168 aa15.24■□□□□ 0.03
CHD4-213ENST00000545584 KLF5Q13887 457 aaPredicted RBP15.24■□□□□ 0.03
CHD4-213ENST00000545584 OVCH2Q7RTZ1 564 aa15.24■□□□□ 0.03
CHD4-213ENST00000545584 OR4S2Q8NH73 311 aa15.24■□□□□ 0.03
CHD4-213ENST00000545584 ZNF430Q9H8G1 570 aaPredicted RBP15.24■□□□□ 0.03
CHD4-213ENST00000545584 TNCP24821 2201 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 A0A0A6YYH2 397 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 IGKV1D-13A0A0B4J2D9 117 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 A6NJ64 397 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 IGLV1-51P01701 117 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 IGKV1-13P0DP09 117 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 SYNJ2BPP57105 145 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 RPL30P62888 115 aaKnown RBP15.23■□□□□ 0.03
CHD4-213ENST00000545584 DEFA5Q01523 94 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 DYRK1AQ13627 763 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 RPEL1Q2QD12 228 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 BEST4Q8NFU0 473 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 OR9G4Q8NGQ1 327 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 OR5H6Q8NGV6 325 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 VSTM2AQ8TAG5 236 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 TCTEX1D2Q8WW35 142 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 SNAPC3Q92966 411 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 RNF167Q9H6Y7 350 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 DIABLOQ9NR28 239 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 SPATA2Q9UM82 520 aa15.23■□□□□ 0.03
CHD4-213ENST00000545584 FAM223BA6NKX1 122 aa15.22■□□□□ 0.03
CHD4-213ENST00000545584 TRIM64CA6NLI5 447 aa15.22■□□□□ 0.03
CHD4-213ENST00000545584 FRMD6-AS1P0C7T7 363 aa15.22■□□□□ 0.03
CHD4-213ENST00000545584 KCTD21Q4G0X4 260 aa15.22■□□□□ 0.03
CHD4-213ENST00000545584 HAPLN4Q86UW8 402 aa15.22■□□□□ 0.03
CHD4-213ENST00000545584 SLC25A42Q86VD7 318 aa15.22■□□□□ 0.03
CHD4-213ENST00000545584 FAM223AQ8IWN6 122 aa15.22■□□□□ 0.03
CHD4-213ENST00000545584 TMEM127O75204 238 aa15.21■□□□□ 0.03
CHD4-213ENST00000545584 OR2A4O95047 310 aa15.21■□□□□ 0.03
CHD4-213ENST00000545584 IGLV2-14P01704 120 aa15.21■□□□□ 0.03
CHD4-213ENST00000545584 RHOGP84095 191 aa15.21■□□□□ 0.03
CHD4-213ENST00000545584 ATP5G2Q06055 141 aa15.21■□□□□ 0.03
CHD4-213ENST00000545584 ZNF66Q6ZN08 573 aa15.21■□□□□ 0.03
CHD4-213ENST00000545584 SBSPONQ8IVN8 264 aa15.21■□□□□ 0.03
CHD4-213ENST00000545584 MFSD4AQ8N468 514 aa15.21■□□□□ 0.03
CHD4-213ENST00000545584 SLC25A38Q96DW6 304 aa15.21■□□□□ 0.03
CHD4-213ENST00000545584 OR2A7Q96R45 310 aa15.21■□□□□ 0.03
CHD4-213ENST00000545584 TAS2R8Q9NYW2 309 aa15.21■□□□□ 0.03
CHD4-213ENST00000545584 TENM3Q9P273 2699 aa15.2■□□□□ 0.02
CHD4-213ENST00000545584 H0Y980 276 aa15.2■□□□□ 0.02
CHD4-213ENST00000545584 HRASP01112 189 aa15.2■□□□□ 0.02
CHD4-213ENST00000545584 FCGR2CP31995 323 aa15.2■□□□□ 0.02
CHD4-213ENST00000545584 KIR2DS2P43631 304 aa15.2■□□□□ 0.02
CHD4-213ENST00000545584 TIMM50Q3ZCQ8 353 aa15.2■□□□□ 0.02
CHD4-213ENST00000545584 HOGA1Q86XE5 327 aa15.2■□□□□ 0.02
CHD4-213ENST00000545584 SGPP2Q8IWX5 399 aa15.2■□□□□ 0.02
CHD4-213ENST00000545584 TTC9CQ8N5M4 171 aa15.2■□□□□ 0.02
CHD4-213ENST00000545584 SECTM1Q8WVN6 248 aa15.2■□□□□ 0.02
CHD4-213ENST00000545584 ZMAT4Q9H898 229 aa15.2■□□□□ 0.02
CHD4-213ENST00000545584 AKIP1Q9NQ31 210 aa15.2■□□□□ 0.02
CHD4-213ENST00000545584 DPPA5A6NC42 116 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 KBTBD11O94819 623 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 TRBV12-3P01733 135 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 PRH1P02810 166 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 EXOSC2Q13868 293 aaKnown RBP15.19■□□□□ 0.02
CHD4-213ENST00000545584 MSMO1Q15800 293 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 FAM209BQ5JX69 171 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 C10orf55Q5SWW7 151 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 CROCCP3Q8IVE0 287 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 VKORC1L1Q8N0U8 176 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 GVQW1Q8N7I0 195 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 OR13F1Q8NGS4 319 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 RCHY1Q96PM5 261 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 AIFM2Q9BRQ8 373 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 AUNIPQ9H7T9 357 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 PEMTQ9UBM1 199 aa15.19■□□□□ 0.02
CHD4-213ENST00000545584 MAS1LP35410 378 aa15.18■□□□□ 0.02
CHD4-213ENST00000545584 CBX5P45973 191 aa15.18■□□□□ 0.02
CHD4-213ENST00000545584 RPL27AP46776 148 aaKnown RBP15.18■□□□□ 0.02
CHD4-213ENST00000545584 EIF4EBP1Q13541 118 aaPredicted RBP15.18■□□□□ 0.02
CHD4-213ENST00000545584 NECAP1Q8NC96 275 aa15.18■□□□□ 0.02
CHD4-213ENST00000545584 ZBTB34Q8NCN2 500 aa15.18■□□□□ 0.02
CHD4-213ENST00000545584 TMEM167AQ8TBQ9 72 aa15.18■□□□□ 0.02
CHD4-213ENST00000545584 FYTTD1Q96QD9 318 aaKnown RBP15.18■□□□□ 0.02
CHD4-213ENST00000545584 VCX3AQ9NNX9 186 aa15.18■□□□□ 0.02
CHD4-213ENST00000545584 CCL28Q9NRJ3 127 aa15.18■□□□□ 0.02
CHD4-213ENST00000545584 ZNF257Q9Y2Q1 563 aa15.18■□□□□ 0.02
CHD4-213ENST00000545584 TRBV9A0A0B4J1U6 114 aa15.17■□□□□ 0.02
CHD4-213ENST00000545584 RBMXL2O75526 392 aaKnown RBP15.17■□□□□ 0.02
CHD4-213ENST00000545584 PPYP01298 95 aa15.17■□□□□ 0.02
CHD4-213ENST00000545584 ZNF45Q02386 682 aa15.17■□□□□ 0.02
CHD4-213ENST00000545584 LCN12Q6JVE5 192 aa15.17■□□□□ 0.02
CHD4-213ENST00000545584 PUSL1Q8N0Z8 303 aaKnown RBP15.17■□□□□ 0.02
CHD4-213ENST00000545584 S100A16Q96FQ6 103 aaKnown RBP15.17■□□□□ 0.02
CHD4-213ENST00000545584 SLC5A7Q9GZV3 580 aa15.17■□□□□ 0.02
CHD4-213ENST00000545584 SIGLEC8Q9NYZ4 499 aa15.17■□□□□ 0.02
CHD4-213ENST00000545584 ADAM30Q9UKF2 790 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms