RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 LPCAT3Q6P1A2 487 aa14.99□□□□□ -0.01
DDX55-211ENST00000544429 OR6Q1Q8NGQ2 317 aa14.99□□□□□ -0.01
DDX55-211ENST00000544429 MRGPRFQ96AM1 343 aa14.99□□□□□ -0.01
DDX55-211ENST00000544429 A6NHS1 94 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 G3V318 75 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 GPR31O00270 319 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 RAB3DO95716 219 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 OPN1MWP04001 364 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 CSF1P09603 554 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 SAA1P0DJI8 122 aaPredicted RBP14.98□□□□□ -0.01
DDX55-211ENST00000544429 OPN1MW2P0DN77 364 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 OPN1MW3P0DN78 364 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 PSMB8P28062 276 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 CATR1Q13166 79 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 FOXE3Q13461 319 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 POU2AF1Q16633 256 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 TEX38Q6PEX7 206 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 PUSL1Q8N0Z8 303 aaKnown RBP14.98□□□□□ -0.01
DDX55-211ENST00000544429 TRIM63Q969Q1 353 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 PARP11Q9NR21 331 aa14.98□□□□□ -0.01
DDX55-211ENST00000544429 TSSC4Q9Y5U2 329 aaPredicted RBP14.98□□□□□ -0.01
DDX55-211ENST00000544429 FBN3Q75N90 2809 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 IGLV1-40P01703 118 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 IFNA6P05013 189 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 VDAC1P21796 283 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 MEF2DQ14814 521 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 PRSS8Q16651 343 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 VMA21Q3ZAQ7 101 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 AKIRIN2Q53H80 203 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 CMTM1Q8IZ96 169 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 SLC38A6Q8IZM9 456 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 SPAG16Q8N0X2 631 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 TERB2Q8NHR7 220 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 MYOZ3Q8TDC0 251 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 CLCC1Q96S66 551 aa14.97□□□□□ -0.01
DDX55-211ENST00000544429 TRAV41A0A0B4J266 112 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 TCRBV4S1A1TA0A5B7 111 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 RLN1P04808 185 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 ELANEP08246 267 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 IL6RP08887 468 aaPredicted RBP14.96□□□□□ -0.01
DDX55-211ENST00000544429 AKAIN1P0CW23 69 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 TREML4Q6UXN2 200 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 IDO2Q6ZQW0 420 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 TCTEX1D1Q8N7M0 179 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 OR4C16Q8NGL9 310 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 OR51H1Q8NH63 302 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 CD300LFQ8TDQ1 290 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 ARPC1AQ92747 370 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 THAP7Q9BT49 309 aaPredicted RBP14.96□□□□□ -0.01
DDX55-211ENST00000544429 PLEKHA2Q9HB19 425 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 FAM212BQ9NTI7 297 aaPredicted RBP14.96□□□□□ -0.01
DDX55-211ENST00000544429 WSB1Q9Y6I7 421 aa14.96□□□□□ -0.01
DDX55-211ENST00000544429 SOX15O60248 233 aa14.95□□□□□ -0.02
DDX55-211ENST00000544429 HPRT1P00492 218 aa14.95□□□□□ -0.02
DDX55-211ENST00000544429 F2RP25116 425 aa14.95□□□□□ -0.02
DDX55-211ENST00000544429 RND3P61587 244 aa14.95□□□□□ -0.02
DDX55-211ENST00000544429 KIAA0141Q14154 515 aaPredicted RBP14.95□□□□□ -0.02
DDX55-211ENST00000544429 FXYD3Q14802 87 aa14.95□□□□□ -0.02
DDX55-211ENST00000544429 ZNF585BQ52M93 769 aa14.95□□□□□ -0.02
DDX55-211ENST00000544429 FAAP20Q6NZ36 180 aa14.95□□□□□ -0.02
DDX55-211ENST00000544429 VKORC1L1Q8N0U8 176 aa14.95□□□□□ -0.02
DDX55-211ENST00000544429 TMEM167AQ8TBQ9 72 aa14.95□□□□□ -0.02
DDX55-211ENST00000544429 ZNF486Q96H40 463 aaPredicted RBP14.95□□□□□ -0.02
DDX55-211ENST00000544429 RHOVQ96L33 236 aa14.95□□□□□ -0.02
DDX55-211ENST00000544429 ZNF430Q9H8G1 570 aaPredicted RBP14.95□□□□□ -0.02
DDX55-211ENST00000544429 SLC2A9Q9NRM0 540 aa14.95□□□□□ -0.02
DDX55-211ENST00000544429 ZFP57Q9NU63 452 aa14.95□□□□□ -0.02
DDX55-211ENST00000544429 SLC2A8Q9NY64 477 aa14.95□□□□□ -0.02
DDX55-211ENST00000544429 NBEAL1Q6ZS30 2694 aa14.94□□□□□ -0.02
DDX55-211ENST00000544429 KBTBD11O94819 623 aa14.94□□□□□ -0.02
DDX55-211ENST00000544429 HRASP01112 189 aa14.94□□□□□ -0.02
DDX55-211ENST00000544429 TAS2R31P59538 309 aa14.94□□□□□ -0.02
DDX55-211ENST00000544429 RPL23AP62750 156 aaKnown RBP14.94□□□□□ -0.02
DDX55-211ENST00000544429 KLF9Q13886 244 aaPredicted RBP14.94□□□□□ -0.02
DDX55-211ENST00000544429 NSUN5P1Q3KNT7 163 aa14.94□□□□□ -0.02
DDX55-211ENST00000544429 PHLDA2Q53GA4 152 aa14.94□□□□□ -0.02
DDX55-211ENST00000544429 CADM3Q8N126 398 aa14.94□□□□□ -0.02
DDX55-211ENST00000544429 Q8N402 240 aa14.94□□□□□ -0.02
DDX55-211ENST00000544429 FAM103A1Q9BTL3 118 aaKnown RBP14.94□□□□□ -0.02
DDX55-211ENST00000544429 SRRQ9GZT4 340 aa14.94□□□□□ -0.02
DDX55-211ENST00000544429 COMMD9Q9P000 198 aa14.94□□□□□ -0.02
DDX55-211ENST00000544429 OR2A4O95047 310 aa14.93□□□□□ -0.02
DDX55-211ENST00000544429 RPLP1P05386 114 aaKnown RBP14.93□□□□□ -0.02
DDX55-211ENST00000544429 PYDC2Q56P42 97 aa14.93□□□□□ -0.02
DDX55-211ENST00000544429 SPANXN2Q5MJ10 180 aa14.93□□□□□ -0.02
DDX55-211ENST00000544429 ASPHD1Q5U4P2 390 aa14.93□□□□□ -0.02
DDX55-211ENST00000544429 OR13C8Q8NGS7 320 aa14.93□□□□□ -0.02
DDX55-211ENST00000544429 VSTM2AQ8TAG5 236 aa14.93□□□□□ -0.02
DDX55-211ENST00000544429 OR2A7Q96R45 310 aa14.93□□□□□ -0.02
DDX55-211ENST00000544429 AIFM2Q9BRQ8 373 aa14.93□□□□□ -0.02
DDX55-211ENST00000544429 BET1LQ9NYM9 111 aa14.93□□□□□ -0.02
DDX55-211ENST00000544429 FOXA2Q9Y261 457 aaPredicted RBP14.93□□□□□ -0.02
DDX55-211ENST00000544429 CREBL2O60519 120 aaPredicted RBP14.92□□□□□ -0.02
DDX55-211ENST00000544429 S1PR2O95136 353 aa14.92□□□□□ -0.02
DDX55-211ENST00000544429 FGF2P09038 288 aa14.92□□□□□ -0.02
DDX55-211ENST00000544429 NQO2P16083 231 aa14.92□□□□□ -0.02
DDX55-211ENST00000544429 SLC6A1P30531 599 aa14.92□□□□□ -0.02
DDX55-211ENST00000544429 CDX1P47902 265 aaPredicted RBP14.92□□□□□ -0.02
DDX55-211ENST00000544429 TMEM267Q0VDI3 215 aaPredicted RBP14.92□□□□□ -0.02
DDX55-211ENST00000544429 CXorf66Q5JRM2 361 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms