RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 WASHC3Q9Y3C0 194 aa10.7□□□□□ -0.7
CHFR-221ENST00000542714 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.7□□□□□ -0.73e-6■■■■■ 27.6
CHFR-221ENST00000542714 CENPEQ02224 2701 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 TRAV3A0A0B4J244 114 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 CENPVL3A0A0U1RRI6 287 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 H7C2Y5 167 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 ARPC5O15511 151 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 ST8SIA3O43173 380 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 KCNAB3O43448 404 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 IGLV2-23P01705 113 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 IL6RP08887 468 aaPredicted RBP10.69□□□□□ -0.7
CHFR-221ENST00000542714 IGHV4-31P0DP07 118 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 PAX6P26367 422 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 ERVK-16P61578 105 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 POLR2GP62487 172 aaKnown RBP eCLIP10.69□□□□□ -0.7
CHFR-221ENST00000542714 HABP2Q14520 560 aaPredicted RBP10.69□□□□□ -0.7
CHFR-221ENST00000542714 MINOS1Q5TGZ0 78 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 OR4A47Q6IF82 309 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 MOB3BQ86TA1 216 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 ZNF546Q86UE3 836 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 CFHR4Q92496 578 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 RITA1Q96K30 269 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 MAGT1Q9H0U3 335 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 HIF1ANQ9NWT6 349 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 TBL2Q9Y4P3 447 aaKnown RBP10.69□□□□□ -0.7
CHFR-221ENST00000542714 MINOS1-NBL1R4GNA1 71 aa10.69□□□□□ -0.7
CHFR-221ENST00000542714 MSGN1A6NI15 193 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 FAM90A9PA6NNJ1 464 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 TIMM23O14925 209 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 HRASP01112 189 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 MC5RP33032 325 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 CEACAM3P40198 252 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 RAB13P51153 203 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 RELBQ01201 579 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 AARDQ4LEZ3 155 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 FBLN7Q53RD9 439 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 PUSL1Q8N0Z8 303 aaKnown RBP10.68□□□□□ -0.7
CHFR-221ENST00000542714 WFDC11Q8NEX6 87 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 OSR1Q8TAX0 266 aaPredicted RBP10.68□□□□□ -0.7
CHFR-221ENST00000542714 DCUN1D4Q92564 292 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 RHOVQ96L33 236 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 NSG2Q9Y328 171 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 HSPB11Q9Y547 144 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 HILPDAQ9Y5L2 63 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 AUP1Q9Y679 476 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 NAV2Q8IVL1 2488 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 PDZD2O15018 2839 aa10.68□□□□□ -0.7
CHFR-221ENST00000542714 NBPF19A0A087WUL8 3843 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 OOSP1A8MZH6 123 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 NPFFO15130 113 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 SHOXO15266 292 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 SSSCA1O60232 199 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 TMEM50AO95807 157 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 AVPP01185 164 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 PET100P0DJ07 73 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 SAA1P0DJI8 122 aaPredicted RBP10.67□□□□□ -0.7
CHFR-221ENST00000542714 SAA4P35542 130 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 ARHGDIBP52566 201 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 PAX9P55771 341 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 OR2B8PP59922 312 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 TMEM249Q2WGJ8 235 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 OR8H3Q8N146 312 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 PIP4P2Q8N4L2 257 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 OR4C13Q8NGP0 309 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 FLYWCH2Q96CP2 140 aaKnown RBP10.67□□□□□ -0.7
CHFR-221ENST00000542714 HARBI1Q96MB7 349 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 FOXC2Q99958 501 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 QTRT1Q9BXR0 403 aaKnown RBP10.67□□□□□ -0.7
CHFR-221ENST00000542714 MS4A7Q9GZW8 240 aaPredicted RBP10.67□□□□□ -0.7
CHFR-221ENST00000542714 MFFQ9GZY8 342 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.67□□□□□ -0.7
CHFR-221ENST00000542714 ZFP57Q9NU63 452 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 HSPB7Q9UBY9 170 aa10.67□□□□□ -0.7
CHFR-221ENST00000542714 IGHV3OR16-10A0A075B7F0 116 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 TRAV40A0A0B4J280 105 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 IGHV1-69DA0A0B4J2H0 117 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 FAM90A26D6RGX4 464 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 E5RGE8 158 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 L7N2F9 121 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 UPK2O00526 184 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 VENTXO95231 258 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 IGHV1-69P01742 117 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 RLN2P04090 185 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 IGHV4-38-2P0DP08 117 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 HKR1P10072 659 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 CNTFRP26992 372 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 RPS16P62249 146 aaKnown RBP10.66□□□□□ -0.7
CHFR-221ENST00000542714 TNFRSF9Q07011 255 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 ZNF345Q14585 488 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 SSX2Q16385 188 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 MRGPRG-AS1Q2M3A8 158 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 RUSC1-AS1Q66K80 236 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 TMUB2Q71RG4 321 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 KCNRGQ8N5I3 272 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 AQP10Q96PS8 301 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 RBKSQ9H477 322 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 C7orf69Q9H7B7 122 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 BET1LQ9NYM9 111 aa10.66□□□□□ -0.7
CHFR-221ENST00000542714 FASNP49327 2511 aaKnown RBP10.65□□□□□ -0.7
CHFR-221ENST00000542714 C15orf61A6NNL5 157 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms