RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 CELSR3Q9NYQ7 3312 aa4.29□□□□□ -1.72
DDB1-219ENST00000541513 PIEZO2Q9H5I5 2752 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 LOC400499M0QZD8 3231 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 IGHV1OR15-1A0A075B7D0 117 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 A0A087WW49 117 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 A0A096LPI6 279 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 A0A0U1RQV1 116 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 A0A0X1KG70 313 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 GMNCA6NCL1 334 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 NKX2-6A6NCS4 301 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 F6UZH7 168 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 UBFD1O14562 309 aaKnown RBP4.28□□□□□ -1.72
DDB1-219ENST00000541513 GALR3O60755 368 aaPredicted RBP4.28□□□□□ -1.72
DDB1-219ENST00000541513 CA11O75493 328 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 OR5H8P0DN80 308 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 MTPNP58546 118 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 TAS2R43P59537 309 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 HIST1H3AP68431 136 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 DCDP81605 110 aaKnown RBP4.28□□□□□ -1.72
DDB1-219ENST00000541513 H3F3AP84243 136 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 TMEM78Q5T7P6 136 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 ZNF613Q6PF04 617 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 TEX261Q6UWH6 196 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 ZCCHC23Q6ZST2 131 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 HIST2H3AQ71DI3 136 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 LINC01551Q86U37 167 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 BAP18Q8IXM2 172 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 C1orf158Q8N1D5 194 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 STPG4Q8N801 248 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 ZNF439Q8NDP4 499 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 NEIL3Q8TAT5 605 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 ORAOV1Q8WV07 137 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 SRSF12Q8WXF0 261 aaKnown RBP4.28□□□□□ -1.72
DDB1-219ENST00000541513 MS4A6EQ96DS6 147 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 C8orf49Q96NF6 230 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 GINS3Q9BRX5 216 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 GNB4Q9HAV0 340 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 SLCO1B3Q9NPD5 702 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 LHX9Q9NQ69 397 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 SPANXCQ9NY87 97 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 POLR1DQ9Y2S0 133 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 PRRC2CQ9Y520 2896 aaKnown RBP4.28□□□□□ -1.72
DDB1-219ENST00000541513 ITPR1Q14643 2758 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 NBEAQ8NFP9 2946 aa4.28□□□□□ -1.72
DDB1-219ENST00000541513 ATMQ13315 3056 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 ZFHX4Q86UP3 3567 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 COL6A6A6NMZ7 2263 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 IGLV3-12A0A075B6K2 115 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 TRAPPC13A5PLN9 417 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 C4orf51C9J302 202 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 AGPAT2O15120 278 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 GYG2O15488 501 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 CRLF1O75462 422 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 TOMM40O96008 361 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 MOSP00540 346 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 STATHP02808 62 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 CRYGDP07320 174 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 ATF1P18846 271 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 TCN2P20062 427 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 PSMB1P20618 241 aaKnown RBP4.27□□□□□ -1.73
DDB1-219ENST00000541513 OR1E2P47887 323 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 FOXA1P55317 472 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 RHOBP62745 196 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 KRTAP1-1Q07627 177 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 SMAGPQ0VAQ4 97 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 ZNF146Q15072 292 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 FCN2Q15485 313 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 TWIST1Q15672 202 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 C1orf100Q5SVJ3 147 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 FAM162BQ5T6X4 162 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 OTPQ5XKR4 325 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 PAMR1Q6UXH9 720 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 Q6ZRP5 223 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 RASSF6Q6ZTQ3 369 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 FAM71E2Q8N5Q1 922 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 COX18Q8N8Q8 333 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 OR4D11Q8NGI4 311 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 OR6T1Q8NGN1 323 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 OR1L8Q8NGR8 309 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 CT55Q8WUE5 264 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 GALMQ96C23 342 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 F2RL3Q96RI0 385 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 CMSS1Q9BQ75 279 aaKnown RBP4.27□□□□□ -1.73
DDB1-219ENST00000541513 TAPBPLQ9BX59 468 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 SUCNR1Q9BXA5 334 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 ENY2Q9NPA8 101 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 C14orf105Q9NVL8 296 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 DNAJC15Q9Y5T4 150 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 YLPM1P49750 1951 aaKnown RBP4.27□□□□□ -1.73
DDB1-219ENST00000541513 ZFYVE26Q68DK2 2539 aa4.27□□□□□ -1.73
DDB1-219ENST00000541513 FAM208BQ5VWN6 2430 aa4.26□□□□□ -1.73
DDB1-219ENST00000541513 LAMA5O15230 3695 aa4.26□□□□□ -1.73
DDB1-219ENST00000541513 CPAMD8Q8IZJ3 1885 aa4.26□□□□□ -1.73
DDB1-219ENST00000541513 KMT2BQ9UMN6 2715 aaPredicted RBP4.26□□□□□ -1.73
DDB1-219ENST00000541513 ATRXP46100 2492 aa4.26□□□□□ -1.73
DDB1-219ENST00000541513 RP1L1Q8IWN7 2480 aaPredicted RBP4.26□□□□□ -1.73
DDB1-219ENST00000541513 H0Y9J4 135 aa4.26□□□□□ -1.73
DDB1-219ENST00000541513 H7C417 338 aa4.26□□□□□ -1.73
DDB1-219ENST00000541513 NPIPB7O75200 414 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms