RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 PARLQ9H300 379 aa8.76□□□□□ -1.01
CHFR-219ENST00000541341 RBKSQ9H477 322 aa8.76□□□□□ -1.01
CHFR-219ENST00000541341 GSX1Q9H4S2 264 aaPredicted RBP8.76□□□□□ -1.01
CHFR-219ENST00000541341 CCL28Q9NRJ3 127 aa8.76□□□□□ -1.01
CHFR-219ENST00000541341 POLDIP2Q9Y2S7 368 aa8.76□□□□□ -1.01
CHFR-219ENST00000541341 GOLT1BQ9Y3E0 138 aa8.76□□□□□ -1.01
CHFR-219ENST00000541341 RBM7Q9Y580 266 aaKnown RBP8.76□□□□□ -1.01
CHFR-219ENST00000541341 IGKV1-12A0A0C4DH73 117 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 A0A1W2PPQ1 181 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.75□□□□□ -1.01
CHFR-219ENST00000541341 ZIC3O60481 467 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 TNFSF13O75888 250 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 IGKV1D-12P01611 117 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 REG1AP05451 166 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 ZNF32P17041 273 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 TUBG1P23258 451 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 GDF1P27539 372 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 CHRNB4P30926 498 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 MAGEA5P43359 124 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 ASCL1P50553 236 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 GFRA1P56159 465 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 B3GALT5-AS1P59052 145 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 SELENOTP62341 195 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 GNB2P62879 340 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 GNG3P63215 75 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 HERPUD1Q15011 391 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 RTL8BQ17RB0 113 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 FAM162BQ5T6X4 162 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 ZNF774Q6NX45 483 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 TRAT1Q6PIZ9 186 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 Q71RC1 249 aaPredicted RBP8.75□□□□□ -1.01
CHFR-219ENST00000541341 LSRQ86X29 649 aaPredicted RBP8.75□□□□□ -1.01
CHFR-219ENST00000541341 OR4F5Q8NH21 305 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 OR51H1Q8NH63 302 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 CORO2AQ92828 525 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 OR4F4Q96R69 305 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 HSPB7Q9UBY9 170 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 CACNG5Q9UF02 275 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 PXMP4Q9Y6I8 212 aa8.75□□□□□ -1.01
CHFR-219ENST00000541341 MED12Q93074 2177 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 A0A0G2JNJ9 132 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 C20orf202A1L168 122 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 KIAA1324LA8MWY0 1029 aaPredicted RBP8.74□□□□□ -1.01
CHFR-219ENST00000541341 TMEM50AO95807 157 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 RAC2P15153 192 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 IGFBP2P18065 325 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 KITLGP21583 273 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 OR3A1P47881 315 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 PSG4Q00888 419 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 RAB31Q13636 194 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 VWC2Q2TAL6 325 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 COL5A1-AS1Q5SY13 56 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 PET117Q6UWS5 81 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 NUFIP2Q7Z417 695 aaKnown RBP8.74□□□□□ -1.01
CHFR-219ENST00000541341 ZIC4Q8N9L1 334 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 NAXEQ8NCW5 288 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 OR2D3Q8NGH3 330 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 OR5P3Q8WZ94 311 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 RPUSD4Q96CM3 377 aaKnown RBP8.74□□□□□ -1.01
CHFR-219ENST00000541341 ZNF385AQ96PM9 386 aaKnown RBP8.74□□□□□ -1.01
CHFR-219ENST00000541341 UHRF2Q96PU4 802 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 OR4C12Q96R67 309 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 RAB9BQ9NP90 201 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 Q9UFV3 132 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 FUT9Q9Y231 359 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 DOCK7Q96N67 2140 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 AKAP6Q13023 2319 aa8.74□□□□□ -1.01
CHFR-219ENST00000541341 YLPM1P49750 1951 aaKnown RBP8.73□□□□□ -1.01
CHFR-219ENST00000541341 ALPK2Q86TB3 2170 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 NIPBLQ6KC79 2804 aaeCLIP8.73□□□□□ -1.01
CHFR-219ENST00000541341 A0A1W2PPV4 95 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 MARCH11A6NNE9 402 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 ZNF705FA8MVS1 300 aaPredicted RBP8.73□□□□□ -1.01
CHFR-219ENST00000541341 RAB29O14966 203 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 MLNRO43193 412 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 DLEU1O43261 78 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 SCTP09683 121 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 ZNF705DP0CH99 300 aaPredicted RBP8.73□□□□□ -1.01
CHFR-219ENST00000541341 ZNF705BP0CI00 300 aaPredicted RBP8.73□□□□□ -1.01
CHFR-219ENST00000541341 GLI4P10075 376 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 CDC34P49427 236 aaPredicted RBP8.73□□□□□ -1.01
CHFR-219ENST00000541341 ATP5IP56385 69 aaPredicted RBP8.73□□□□□ -1.01
CHFR-219ENST00000541341 Q0VG73 95 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 SPANXN5Q5MJ07 72 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 ODF3L1Q8IXM7 274 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 FAM58AQ8N1B3 248 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 CMTM2Q8TAZ6 248 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 TMEM37Q8WXS4 190 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 NANOS1Q8WY41 292 aaKnown RBP8.73□□□□□ -1.01
CHFR-219ENST00000541341 PCGF1Q9BSM1 259 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 RSG1Q9BU20 258 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 WNT5BQ9H1J7 359 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 GPR35Q9HC97 309 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 TMEM106BQ9NUM4 274 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 FAM215AQ9Y5M1 114 aa8.73□□□□□ -1.01
CHFR-219ENST00000541341 A0A0U1RQK1 487 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 ZNF320A2RRD8 509 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 FAM221AA4D161 298 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 SHISA8B8ZZ34 492 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 C11orf94C9JXX5 98 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms