RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 IMMP2LQ96T52 175 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 FOXD3Q9UJU5 478 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 A0A1W2PQF6 199 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 ODAMA1E959 279 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 SSTR5P35346 364 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 RND2P52198 227 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 IZUMO4Q1ZYL8 232 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 CCDC144NLQ6NUI1 221 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 RND1Q92730 232 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 TRBV6-7A0A0A0MS04 114 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 C5orf67F2Z3F1 127 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 RGPD3A6NKT7 1758 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 RGPD4Q7Z3J3 1758 aa12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 DICER1Q9UPY3 1922 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-207ENST00000541122 H0YIZ8 118 aa12.77□□□□□ -0.36
SMARCA4-207ENST00000541122 IGHV3OR15-7A0A075B7D8 119 aa12.77□□□□□ -0.36
SMARCA4-207ENST00000541122 C17orf51A8MQB3 221 aa12.77□□□□□ -0.36
SMARCA4-207ENST00000541122 SPRED2Q7Z698 418 aa12.77□□□□□ -0.36
SMARCA4-207ENST00000541122 SFTPA2Q8IWL1 248 aa12.77□□□□□ -0.36
SMARCA4-207ENST00000541122 SCARF2Q96GP6 870 aaPredicted RBP12.77□□□□□ -0.36
SMARCA4-207ENST00000541122 GPHA2Q96T91 129 aa12.77□□□□□ -0.36
SMARCA4-207ENST00000541122 NRN1Q9NPD7 142 aa12.77□□□□□ -0.36
SMARCA4-207ENST00000541122 TRAV30A0A087WSZ9 112 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 IZUMO1RA6ND01 250 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 LINC00614P0C842 121 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 GAS1P54826 345 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 NUTF2P61970 127 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 LRTM2Q8N967 370 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 COPS9Q8WXC6 57 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 ARRDC1-AS1Q9H2J1 176 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 RBBP6Q7Z6E9 1792 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 A0A1W2PPE3 182 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 SLC25A17O43808 307 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 SERF1AO75920 110 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 AGFG2O95081 481 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 TBR1Q16650 682 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 WNT5BQ9H1J7 359 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 CALYQ9NYX4 217 aa12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 F11RQ9Y624 299 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 ASCC3Q8N3C0 2202 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-207ENST00000541122 FAM157AC9JC47 383 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 RBFOX2O43251 390 aaKnown RBP eCLIP12.76□□□□□ -0.373e-7■■□□□ 14.3
SMARCA4-207ENST00000541122 EGR1P18146 543 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 SOX8P57073 446 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 TTC9CQ8N5M4 171 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 SLC25A28Q96A46 364 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 MS4A5Q9H3V2 200 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 P2RY6Q15077 328 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 MMDQ15546 238 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 FBLN7Q53RD9 439 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 SAMD13Q5VXD3 122 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 CHRNA10Q9GZZ6 450 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 IGHV4-34P06331 123 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 HES3Q5TGS1 186 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 TPRX1Q8N7U7 411 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 C2orf88Q9BSF0 95 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 RTN4RQ9BZR6 473 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 IDI2-AS1Q9NZ38 188 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 SPCS1Q9Y6A9 102 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 CD3EP07766 207 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 C3AR1Q16581 482 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 C2orf83Q53S99 150 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 OR4D5Q8NGN0 318 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 FAM131CQ96AQ9 280 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 HES7Q9BYE0 225 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 TBX6O95947 436 aaPredicted RBP12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 OR4A5Q8NH83 315 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 C5orf30Q96GV9 206 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 NEU1Q99519 415 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 SMOC1Q9H4F8 434 aa12.76□□□□□ -0.37
SMARCA4-207ENST00000541122 OR11H12B2RN74 326 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 OR11H1Q8NG94 326 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 OR11H2Q8NH07 326 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 MYO7AQ13402 2215 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 PPIAL4EA0A075B759 164 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 TRAV9-2A0A087WT02 112 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 LOC101059948A0A1B0GTJ6 334 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 PPIAL4DF5H284 164 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 PPIAL4FP0DN26 164 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 ID1P41134 155 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 FAM117AQ9C073 453 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 PPIAL4AQ9Y536 164 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 TNFSF13O75888 250 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 IGKV3-11P04433 115 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 ADIPOQQ15848 244 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 C9orf50Q5SZB4 431 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 Q6AWC8 147 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 MBD3L1Q8WWY6 194 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 SSBP3Q9BWW4 388 aaPredicted RBP12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 JKAMPQ9P055 326 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 C7orf71A4D174 169 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 SLC17A3O00476 420 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 LGALS3P17931 250 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 OR10J3Q5JRS4 329 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 C1QL2Q7Z5L3 287 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 TTTY12Q9BZ98 90 aa12.75□□□□□ -0.37
SMARCA4-207ENST00000541122 ZNF324O75467 553 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-207ENST00000541122 ANOS1P23352 680 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms