RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 DUX3Q96PT4 197 aa8.88□□□□□ -0.99
TMEM258-205ENST00000540434 MTFP1Q9UDX5 166 aa8.88□□□□□ -0.99
TMEM258-205ENST00000540434 A3GALT2U3KPV4 340 aa8.88□□□□□ -0.99
TMEM258-205ENST00000540434 PLECQ15149 4684 aaKnown RBP8.87□□□□□ -0.99
TMEM258-205ENST00000540434 DPPA5A6NC42 116 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 CCDC160A6NGH7 325 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 E7EUB6 86 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 SULT1C2O00338 296 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 SHOXO15266 292 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 IGLV1-40P01703 118 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 IGHG4P01861 327 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 ZNF735P0CB33 412 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 RPL23AP62750 156 aaKnown RBP8.87□□□□□ -0.99
TMEM258-205ENST00000540434 FAAP20Q6NZ36 180 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 KCTD9Q7L273 389 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 RNF152Q8N8N0 203 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 MINDY2Q8NBR6 621 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 OR4F17Q8NGA8 305 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 MCFD2Q8NI22 146 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 DIRAS2Q96HU8 199 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 OR4F4Q96R69 305 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 TSNAXQ99598 290 aaKnown RBP8.87□□□□□ -0.99
TMEM258-205ENST00000540434 C6orf62Q9GZU0 229 aaPredicted RBP8.87□□□□□ -0.99
TMEM258-205ENST00000540434 KIAA1456Q9P272 454 aa8.87□□□□□ -0.99
TMEM258-205ENST00000540434 RSL24D1Q9UHA3 163 aaKnown RBP8.87□□□□□ -0.99
TMEM258-205ENST00000540434 TSSC4Q9Y5U2 329 aaPredicted RBP8.87□□□□□ -0.99
TMEM258-205ENST00000540434 TRAV3A0A0B4J244 114 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 TRAV41A0A0B4J266 112 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 A0A1B0GW64 132 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 RBMXL2O75526 392 aaKnown RBP8.86□□□□□ -0.99
TMEM258-205ENST00000540434 PGLYRP1O75594 196 aaPredicted RBP8.86□□□□□ -0.99
TMEM258-205ENST00000540434 SAA1P0DJI8 122 aaPredicted RBP8.86□□□□□ -0.99
TMEM258-205ENST00000540434 APELAP0DMC3 54 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 PSMB8P28062 276 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 HOXD3P31249 432 aaPredicted RBP8.86□□□□□ -0.99
TMEM258-205ENST00000540434 RCVRNP35243 200 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 LGALS7P47929 136 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 CRIP2P52943 208 aaPredicted RBP8.86□□□□□ -0.99
TMEM258-205ENST00000540434 PLGLAQ15195 96 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 ECSCRQ19T08 205 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 DEFB136Q30KP8 78 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 ZNF585BQ52M93 769 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 C10orf55Q5SWW7 151 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 ZNF562Q6V9R5 426 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 C8orf86Q6ZUL3 223 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 PPP1R27Q86WC6 154 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 LFNGQ8NES3 379 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 OR4X2Q8NGF9 303 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 MYOZ3Q8TDC0 251 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 TCTEX1D2Q8WW35 142 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 ADTRPQ96IZ2 230 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 GNB4Q9HAV0 340 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 ZNF580Q9UK33 172 aa8.86□□□□□ -0.99
TMEM258-205ENST00000540434 GABARAPH6UMI1 98 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 SLC22A5O76082 557 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 SPDEFO95238 335 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 RPA2P15927 270 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 PI3P19957 117 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 CD33P20138 364 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 TAS2R46P59540 309 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 UBE2KP61086 200 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 GNB1P62873 340 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 EGFEM1PQ0D2K5 195 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 FXYD3Q14802 87 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 PRSS8Q16651 343 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 RTL8BQ17RB0 113 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 KHDC1LQ5JSQ8 128 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 TEX38Q6PEX7 206 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 ZNF66Q6ZN08 573 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 C19orf35Q6ZS72 473 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 LHFPL1Q86WI0 220 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 SPAG16Q8N0X2 631 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 OR6F1Q8NGZ6 308 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 OR51H1Q8NH63 302 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 MUC7Q8TAX7 377 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 FCAMRQ8WWV6 532 aa8.85□□□□□ -0.99
TMEM258-205ENST00000540434 HSD17B10Q99714 261 aaKnown RBP8.85□□□□□ -0.99
TMEM258-205ENST00000540434 ZNF430Q9H8G1 570 aaPredicted RBP8.85□□□□□ -0.99
TMEM258-205ENST00000540434 A0A1W2PN81 502 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 CGB1A6NKQ9 187 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 NOL3O60936 208 aaKnown RBP8.84□□□□□ -0.99
TMEM258-205ENST00000540434 TPPPO94811 219 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 CD74P04233 296 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 IL6RP08887 468 aaPredicted RBP8.84□□□□□ -0.99
TMEM258-205ENST00000540434 RRASP10301 218 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 VDAC1P21796 283 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 CHRNA7P36544 502 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 HERV-K104P61576 105 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 SLC35B1P78383 322 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 DEFA5Q01523 94 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 FOXE3Q13461 319 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 IL18Q14116 193 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 MSMO1Q15800 293 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 ZNF79Q15937 498 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 PHLDA2Q53GA4 152 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 SSX9Q7RTT3 188 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 PUSL1Q8N0Z8 303 aaKnown RBP8.84□□□□□ -0.99
TMEM258-205ENST00000540434 ZNF491Q8N8L2 437 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 TEX45Q8NA69 505 aa8.84□□□□□ -0.99
TMEM258-205ENST00000540434 TMEM229BQ8NBD8 167 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms