RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 C5AR2Q9P296 337 aa5.17□□□□□ -1.58
SNHG1-211ENST00000539921 CLCF1Q9UBD9 225 aa5.17□□□□□ -1.58
SNHG1-211ENST00000539921 VPREB3Q9UKI3 123 aa5.17□□□□□ -1.58
SNHG1-211ENST00000539921 B9D1Q9UPM9 204 aa5.17□□□□□ -1.58
SNHG1-211ENST00000539921 OR2W1Q9Y3N9 320 aa5.17□□□□□ -1.58
SNHG1-211ENST00000539921 HLA-DRB4X5D2U9 266 aa5.17□□□□□ -1.58
SNHG1-211ENST00000539921 TMEM131Q92545 1883 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 A0A1B0GX51 115 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 SMIM27A0A1W2PRY6 76 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 A4D1N5 150 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 E9PLN8 166 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 F8WDY8 70 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 M0QXV9 152 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 ERI3O43414 337 aaKnown RBP5.16□□□□□ -1.58
SNHG1-211ENST00000539921 CHST1O43916 411 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 MPDU1O75352 247 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 OR7C1O76099 320 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-211ENST00000539921 AGFG2O95081 481 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 CNIH1O95406 144 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 IGHV3-7P01780 117 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 CEACAM5P06731 702 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 CELA3AP09093 270 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 HLA-DOBP13765 273 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 PVRP15151 417 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 SELPP16109 830 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 SRIP30626 198 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 ASIPP42127 132 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 GPR1P46091 355 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 ZNF157P51786 506 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-211ENST00000539921 RPS24P62847 133 aaKnown RBP5.16□□□□□ -1.58
SNHG1-211ENST00000539921 GNB1P62873 340 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 MFAP5Q13361 173 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 SQSTM1Q13501 440 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 Q6P435 159 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 TEPPQ6URK8 271 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 Q6ZUT4 128 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 HMGN2P46Q86SG4 172 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 DTX1Q86Y01 620 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 C2orf73Q8N5S3 287 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-211ENST00000539921 PERPQ96FX8 193 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 AMELYQ99218 206 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 SPAG8Q99932 426 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-211ENST00000539921 CITED1Q99966 193 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 TIMM29Q9BSF4 260 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 FBRSQ9HAH7 460 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 NGBQ9NPG2 151 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 STARD5Q9NSY2 213 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 MRPS17Q9Y2R5 130 aaKnown RBP5.16□□□□□ -1.58
SNHG1-211ENST00000539921 SIGLEC9Q9Y336 463 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 V9GYV3 84 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 ATG2AQ2TAZ0 1938 aa5.16□□□□□ -1.58
SNHG1-211ENST00000539921 SCN3AQ9NY46 2000 aa5.15□□□□□ -1.58
SNHG1-211ENST00000539921 IGKV1D-42A0A075B6H8 117 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 EDDM13A0A1B0GTR0 161 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 A0A1W2PRD5 423 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 A0A1W2PRF3 423 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 A0A1W2PRM7 423 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 IZUMO1RA6ND01 250 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 SHISA9B4DS77 424 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 F2Z2F3 143 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 SNAI2O43623 268 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 SYNGR2O43760 224 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 SLC16A7O60669 478 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 PAGE4O60829 102 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 TBL1XO60907 577 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 FCN3O75636 299 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 CER1O95813 267 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 PF4P02776 101 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 CA3P07451 260 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 FGF6P10767 208 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 IGFBP2P18065 325 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 NPPCP23582 126 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 GATA2P23769 480 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-211ENST00000539921 FABP6P51161 128 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 RPL27P61353 136 aaKnown RBP5.15□□□□□ -1.59
SNHG1-211ENST00000539921 NTHL1P78549 312 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 DUSP2Q05923 314 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 RPL18Q07020 188 aaKnown RBP5.15□□□□□ -1.59
SNHG1-211ENST00000539921 FOXI1Q12951 378 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 COL9A2Q14055 689 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-211ENST00000539921 ZNF146Q15072 292 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 TAL2Q16559 108 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 SGCBQ16585 318 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 PDLIM3Q53GG5 364 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-211ENST00000539921 FAM120AOSQ5T036 256 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 TMEM14EPQ6UXP3 125 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 PPP1R27Q86WC6 154 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 LSRQ86X29 649 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-211ENST00000539921 LRRC75A-AS1Q8N1F1 130 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 CRIPAKQ8N1N5 446 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 TEX29Q8N6K0 151 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 ZNF611Q8N823 705 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 TEX45Q8NA69 505 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 SMRP1Q8NCR6 262 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 OR10G6Q8NH81 332 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 OR1F12Q8NHA8 337 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 LMX1AQ8TE12 382 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 PIGTQ969N2 578 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 Q96M66 194 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms