RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 OR2B11Q5JQS5 317 aa17.02■□□□□ 0.32
SCARB1-206ENST00000539320 OVCH2Q7RTZ1 564 aa17.02■□□□□ 0.32
SCARB1-206ENST00000539320 ADAD2Q8NCV1 583 aaKnown RBP17.02■□□□□ 0.32
SCARB1-206ENST00000539320 SLC25A38Q96DW6 304 aa17.02■□□□□ 0.32
SCARB1-206ENST00000539320 RNF167Q9H6Y7 350 aa17.02■□□□□ 0.32
SCARB1-206ENST00000539320 ZNF430Q9H8G1 570 aaPredicted RBP17.02■□□□□ 0.32
SCARB1-206ENST00000539320 ANXA10Q9UJ72 324 aa17.02■□□□□ 0.32
SCARB1-206ENST00000539320 TUSC2O75896 110 aa17.01■□□□□ 0.31
SCARB1-206ENST00000539320 ACTL6BO94805 426 aa17.01■□□□□ 0.31
SCARB1-206ENST00000539320 RPL30P62888 115 aaKnown RBP17.01■□□□□ 0.31
SCARB1-206ENST00000539320 NEDD8Q15843 81 aa17.01■□□□□ 0.31
SCARB1-206ENST00000539320 ZNF343Q6P1L6 599 aa17.01■□□□□ 0.31
SCARB1-206ENST00000539320 OR5H6Q8NGV6 325 aa17.01■□□□□ 0.31
SCARB1-206ENST00000539320 USMG5Q96IX5 58 aa17.01■□□□□ 0.31
SCARB1-206ENST00000539320 DCUN1D5Q9BTE7 237 aa17.01■□□□□ 0.31
SCARB1-206ENST00000539320 TRIM64CA6NLI5 447 aa17■□□□□ 0.31
SCARB1-206ENST00000539320 IGLV1-51P01701 117 aa17■□□□□ 0.31
SCARB1-206ENST00000539320 IGLV2-14P01704 120 aa17■□□□□ 0.31
SCARB1-206ENST00000539320 KCTD21Q4G0X4 260 aa17■□□□□ 0.31
SCARB1-206ENST00000539320 NBEAL2Q6ZNJ1 2754 aa17■□□□□ 0.31
SCARB1-206ENST00000539320 ANKRD13BQ86YJ7 626 aa17■□□□□ 0.31
SCARB1-206ENST00000539320 MMD2Q8IY49 270 aa17■□□□□ 0.31
SCARB1-206ENST00000539320 OR4S2Q8NH73 311 aa17■□□□□ 0.31
SCARB1-206ENST00000539320 PEF1Q9UBV8 284 aaKnown RBP17■□□□□ 0.31
SCARB1-206ENST00000539320 ARPC4P59998 168 aa16.99■□□□□ 0.31
SCARB1-206ENST00000539320 KLF5Q13887 457 aaPredicted RBP16.99■□□□□ 0.31
SCARB1-206ENST00000539320 C10orf55Q5SWW7 151 aa16.99■□□□□ 0.31
SCARB1-206ENST00000539320 IDNKQ5T6J7 187 aa16.99■□□□□ 0.31
SCARB1-206ENST00000539320 OR9G4Q8NGQ1 327 aa16.99■□□□□ 0.31
SCARB1-206ENST00000539320 TCTEX1D2Q8WW35 142 aa16.99■□□□□ 0.31
SCARB1-206ENST00000539320 HSD17B10Q99714 261 aaKnown RBP16.99■□□□□ 0.31
SCARB1-206ENST00000539320 SPIN2AQ99865 258 aa16.99■□□□□ 0.31
SCARB1-206ENST00000539320 SPIN2BQ9BPZ2 258 aa16.99■□□□□ 0.31
SCARB1-206ENST00000539320 TRAV18A0A075B6X5 111 aa16.98■□□□□ 0.31
SCARB1-206ENST00000539320 A0A0A6YYH2 397 aa16.98■□□□□ 0.31
SCARB1-206ENST00000539320 A6NJ64 397 aa16.98■□□□□ 0.31
SCARB1-206ENST00000539320 RBMXL2O75526 392 aaKnown RBP16.98■□□□□ 0.31
SCARB1-206ENST00000539320 TRBV12-3P01733 135 aa16.98■□□□□ 0.31
SCARB1-206ENST00000539320 FRMD6-AS1P0C7T7 363 aa16.98■□□□□ 0.31
SCARB1-206ENST00000539320 SYNJ2BPP57105 145 aa16.98■□□□□ 0.31
SCARB1-206ENST00000539320 SBSPONQ8IVN8 264 aa16.98■□□□□ 0.31
SCARB1-206ENST00000539320 BEST4Q8NFU0 473 aa16.98■□□□□ 0.31
SCARB1-206ENST00000539320 FAM223BA6NKX1 122 aa16.97■□□□□ 0.31
SCARB1-206ENST00000539320 RHOGP84095 191 aa16.97■□□□□ 0.31
SCARB1-206ENST00000539320 EIF4EBP1Q13541 118 aaPredicted RBP16.97■□□□□ 0.31
SCARB1-206ENST00000539320 EXOSC2Q13868 293 aaKnown RBP16.97■□□□□ 0.31
SCARB1-206ENST00000539320 RPEL1Q2QD12 228 aa16.97■□□□□ 0.31
SCARB1-206ENST00000539320 FAM223AQ8IWN6 122 aa16.97■□□□□ 0.31
SCARB1-206ENST00000539320 TAS2R8Q9NYW2 309 aa16.97■□□□□ 0.31
SCARB1-206ENST00000539320 SPATA2Q9UM82 520 aa16.97■□□□□ 0.31
SCARB1-206ENST00000539320 ZNF66Q6ZN08 573 aa16.96■□□□□ 0.31
SCARB1-206ENST00000539320 VKORC1L1Q8N0U8 176 aa16.96■□□□□ 0.31
SCARB1-206ENST00000539320 GVQW1Q8N7I0 195 aa16.96■□□□□ 0.31
SCARB1-206ENST00000539320 VSTM2AQ8TAG5 236 aa16.96■□□□□ 0.31
SCARB1-206ENST00000539320 AKIP1Q9NQ31 210 aa16.96■□□□□ 0.31
SCARB1-206ENST00000539320 KBTBD11O94819 623 aa16.95■□□□□ 0.3
SCARB1-206ENST00000539320 PRH1P02810 166 aa16.95■□□□□ 0.3
SCARB1-206ENST00000539320 ZNF45Q02386 682 aa16.95■□□□□ 0.3
SCARB1-206ENST00000539320 MSMO1Q15800 293 aa16.95■□□□□ 0.3
SCARB1-206ENST00000539320 HOGA1Q86XE5 327 aa16.95■□□□□ 0.3
SCARB1-206ENST00000539320 MFSD4AQ8N468 514 aa16.95■□□□□ 0.3
SCARB1-206ENST00000539320 OR13F1Q8NGS4 319 aa16.95■□□□□ 0.3
SCARB1-206ENST00000539320 RCHY1Q96PM5 261 aa16.95■□□□□ 0.3
SCARB1-206ENST00000539320 AUNIPQ9H7T9 357 aa16.95■□□□□ 0.3
SCARB1-206ENST00000539320 ADAM30Q9UKF2 790 aa16.95■□□□□ 0.3
SCARB1-206ENST00000539320 TRBV9A0A0B4J1U6 114 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 TMEM127O75204 238 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 OR2A4O95047 310 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 FCGR2CP31995 323 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 KIR2DS2P43631 304 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 TATDN3Q17R31 274 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 TIMM50Q3ZCQ8 353 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 IL34Q6ZMJ4 242 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 SLC25A42Q86VD7 318 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 PUSL1Q8N0Z8 303 aaKnown RBP16.94■□□□□ 0.3
SCARB1-206ENST00000539320 TTC9CQ8N5M4 171 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 TMEM167AQ8TBQ9 72 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 SECTM1Q8WVN6 248 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 SNAPC3Q92966 411 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 OR2A7Q96R45 310 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 DIABLOQ9NR28 239 aa16.94■□□□□ 0.3
SCARB1-206ENST00000539320 RYR3Q15413 4870 aa16.93■□□□□ 0.3
SCARB1-206ENST00000539320 H0Y980 276 aa16.93■□□□□ 0.3
SCARB1-206ENST00000539320 PPYP01298 95 aa16.93■□□□□ 0.3
SCARB1-206ENST00000539320 PTHLHP12272 177 aa16.93■□□□□ 0.3
SCARB1-206ENST00000539320 RPL27AP46776 148 aaKnown RBP16.93■□□□□ 0.3
SCARB1-206ENST00000539320 ATP5G2Q06055 141 aa16.93■□□□□ 0.3
SCARB1-206ENST00000539320 SGPP2Q8IWX5 399 aa16.93■□□□□ 0.3
SCARB1-206ENST00000539320 GPHA2Q96T91 129 aa16.93■□□□□ 0.3
SCARB1-206ENST00000539320 CCL28Q9NRJ3 127 aa16.93■□□□□ 0.3
SCARB1-206ENST00000539320 ZNF257Q9Y2Q1 563 aa16.93■□□□□ 0.3
SCARB1-206ENST00000539320 HMX3A6NHT5 357 aa16.92■□□□□ 0.3
SCARB1-206ENST00000539320 TEX22C9J3V5 150 aa16.92■□□□□ 0.3
SCARB1-206ENST00000539320 BMPR1BO00238 502 aa16.92■□□□□ 0.3
SCARB1-206ENST00000539320 IGHV4-30-4P0DP06 118 aa16.92■□□□□ 0.3
SCARB1-206ENST00000539320 BRWD1-AS2P59051 145 aa16.92■□□□□ 0.3
SCARB1-206ENST00000539320 Q8N1Y9 231 aa16.92■□□□□ 0.3
SCARB1-206ENST00000539320 NECAP1Q8NC96 275 aa16.92■□□□□ 0.3
SCARB1-206ENST00000539320 SIGLEC8Q9NYZ4 499 aa16.92■□□□□ 0.3
SCARB1-206ENST00000539320 TNFSF12O43508 249 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms