RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 C2orf50Q96LR7 162 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 OR4K3Q96R72 315 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 PKMYT1Q99640 499 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 EBNA1BP2Q99848 306 aaKnown RBP0.59□□□□□ -2.31
HIF1A-204ENST00000539097 TM2D3Q9BRN9 247 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM222Q9H0R3 208 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 SMDT1Q9H4I9 107 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 TRIM45Q9H8W5 580 aaPredicted RBP0.59□□□□□ -2.31
HIF1A-204ENST00000539097 PDFQ9HBH1 243 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 ANKHQ9HCJ1 492 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 TAAR3PQ9P1P4 343 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 FARSAQ9Y285 508 aaKnown RBP0.59□□□□□ -2.31
HIF1A-204ENST00000539097 ASXL1Q8IXJ9 1541 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 MYLKQ15746 1914 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 IGSF23A1L1A6 192 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 MIF4GDA9UHW6 222 aaKnown RBP0.59□□□□□ -2.32
HIF1A-204ENST00000539097 INS-IGF2F8WCM5 200 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 PDYNP01213 254 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 OCM2P0CE71 109 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 TAC1P20366 129 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 NTF3P20783 257 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 TUFMP49411 452 aaKnown RBP0.59□□□□□ -2.32
HIF1A-204ENST00000539097 KRTAP10-10P60014 251 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 HIST1H3AP68431 136 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 SLC35A1P78382 337 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 H3F3AP84243 136 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 ATP5G2Q06055 141 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 SRSF6Q13247 344 aaKnown RBP0.59□□□□□ -2.32
HIF1A-204ENST00000539097 SNCBQ16143 134 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 ACSM3Q53FZ2 586 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 HES5Q5TA89 166 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 HAGHLQ6PII5 290 aaPredicted RBP0.59□□□□□ -2.32
HIF1A-204ENST00000539097 HIST2H3AQ71DI3 136 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 MRPL55Q7Z7F7 128 aaKnown RBP0.59□□□□□ -2.32
HIF1A-204ENST00000539097 MDP1Q86V88 176 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF615Q8N8J6 731 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 CYB561D1Q8N8Q1 229 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 ST6GALNAC3Q8NDV1 305 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 OR5T1Q8NG75 326 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 LMX1AQ8TE12 382 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 ACOT12Q8WYK0 555 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 TRIB3Q96RU7 358 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 STACQ99469 402 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 CDX2Q99626 313 aaPredicted RBP0.59□□□□□ -2.32
HIF1A-204ENST00000539097 UPK3BQ9BT76 320 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM243Q9BU79 118 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 OPTCQ9UBM4 332 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 MYO18BQ8IUG5 2567 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 SCN8AQ9UQD0 1980 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 C5P01031 1676 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 CTTNBP2Q8WZ74 1663 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 ARHGEF10O15013 1369 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 OVOS2A0A0J9YW53 1432 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 OVOS2Q6IE36 1432 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 KIAA1107Q9UPP5 1409 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 NUMA1Q14980 2115 aa0.59□□□□□ -2.32
HIF1A-204ENST00000539097 EXOC1LA0A1B0GW35 172 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 ARPC5O15511 151 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 CCNKO75909 580 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 KCNK2O95069 426 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF682O95780 498 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 TTRP02766 147 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 RPS17P08708 135 aaKnown RBP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 CD7P09564 240 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 OMPP47874 163 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 TNNC1P63316 161 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 GTF2BQ00403 316 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 IL5RAQ01344 420 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 CAV1Q03135 178 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 LRRC75BQ2VPJ9 315 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 ACOT6Q3I5F7 207 aaPredicted RBP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 C6orf99Q4VX62 202 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 TRMT12Q53H54 448 aaKnown RBP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 SPATA31B1PQ5VZV4 182 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 OPN5Q6U736 354 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM144Q7Z5S9 345 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF101Q8IZC7 436 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 PXT1Q8NFP0 134 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 OR8S1Q8NH09 359 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 MUC7Q8TAX7 377 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 GALMQ96C23 342 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 VAT1Q99536 393 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 GPR22Q99680 433 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 C2orf88Q9BSF0 95 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 IFT46Q9NQC8 304 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 MRPL27Q9P0M9 148 aaKnown RBP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 KLF13Q9Y2Y9 288 aaPredicted RBP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 V9GYY9 64 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 RTL1A6NKG5 1358 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 LTN1O94822 1766 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 MYH13Q9UKX3 1938 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 PLXNC1O60486 1568 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 COL14A1Q05707 1796 aaKnown RBP0.58□□□□□ -2.32
HIF1A-204ENST00000539097 IGHV1-69DA0A0B4J2H0 117 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 A0A0G2JMP0 313 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 A0A0X1KG70 313 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM150BA6NC51 233 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 COLCA2A8K830 154 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 SEC14L6B5MCN3 397 aa0.58□□□□□ -2.32
HIF1A-204ENST00000539097 E5RI56 91 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms